Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0648 |
Symbol | |
ID | 6783481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 769625 |
End bp | 770452 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642766621 |
Product | extracellular solute-binding protein, family 1 |
Protein accession | YP_002137472 |
Protein GI | 197117045 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0226] ABC-type phosphate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.117296 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAGAGA AGCGGTTCAT CCCCATAGCG TTGGTCCTCT GTCTGGCACT GGGATGGGGA CAGGCGGCAC CGGCCCAGGA GATTGTAAGG ATCAGCGGCA CCGGAGCGGG AGTGGCCCTG ATGGCGCCGC TCGTCGAGGT TTTCGAGAAG GAGAATAAGG GGATCAAGGT CCACCTGGAG AAAAGCCTGG GGAGCACGGC CTCCATAAAG GCGACGGTCA AGAGCGCGCT GGACCTTGCC ATTTCCGGGC GGCCGCTGAA GCCGGCCGAG AGCGCGGAGG GGCTGGTCCA GCTCGAATAC GGCAAGAGTC CTTTCGTGGT GGTGACCCAT GCCGGTACCA AGCAGAGCAA CATCTCGCTG AAAGAGGTGA TCGACATGTA CTCCGGGAAG ATCCCCAAGT GGCCCAACGG CGACTACGTC CGCGTGGTGC TGCGCCCCAA CGAGGACGTC GACACCAAGC TCGTGCGCGC CATCTCGCCC GATATGGACA TGGCCGTGAC AGCCGCACAG TCGCGCAAGG ACATGCTGCT CGCCATCACC GATAACGAGG GGTTCGACGC GTTGAAAAGG ACCCCGGGGA CGATCGCCTT CCTGGCGCTC ACCCTTCCCC TCTCCCAGCC TGGGAGCGTC AAGGTCCTGC GTCTGGACGG CATGCAGGGA AGCGTCGCCA CCCTGGCCGG GGGGAAGTAC CCCTACGTCA AGCCGCTCTA CCTGGTGACC AGGAAAGAGA GCTCCGCCGC GACGGAGAAG TTCGTGAAGT TCCTCTACTC TAAGAAGGGA AAGTCGCTGG CAGTCAGGCA CGGGCTGCTG CCGACCGGGA TTAAATGA
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Protein sequence | MVEKRFIPIA LVLCLALGWG QAAPAQEIVR ISGTGAGVAL MAPLVEVFEK ENKGIKVHLE KSLGSTASIK ATVKSALDLA ISGRPLKPAE SAEGLVQLEY GKSPFVVVTH AGTKQSNISL KEVIDMYSGK IPKWPNGDYV RVVLRPNEDV DTKLVRAISP DMDMAVTAAQ SRKDMLLAIT DNEGFDALKR TPGTIAFLAL TLPLSQPGSV KVLRLDGMQG SVATLAGGKY PYVKPLYLVT RKESSAATEK FVKFLYSKKG KSLAVRHGLL PTGIK
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