Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0642 |
Symbol | glyS |
ID | 6783475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 762351 |
End bp | 764414 |
Gene Length | 2064 bp |
Protein Length | 687 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642766615 |
Product | glycyl-tRNA synthetase subunit beta |
Protein accession | YP_002137466 |
Protein GI | 197117039 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.91532 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAAGG ACCTGTTTCT GGAGATAGGT TGCGAAGAGA TCCCGGCCGG CTTCGTCCCC AAGGCGATGG CCGACATGGA GCTTTTGATC AAGAAAGAGT TCGACAGCGC CCGCATCGAG TACGGCGAGA TCGTGACGCT CGGTACCCCG CGCCGCCTGG TGCTGGCCGT TAAGGGGGTC GCCGAGAGGC AGCCTGACGC GGAACTGACC GCGATGGGGC CGGCCAAAAG CCACGCCTAC GACGCCGACG GGAACCCCAC CAAGGCAGCC CAGGGCTTCG CCCGCGGCCA GGGAATCGAT GTCTCGCAGC TGAAGCTCGT GACCACGGAG AAAGGCGAGT ATCTCGCCGC CGTGAAAAGC GAGATAGGCC GCGCTACGGC AGAACTCCTC CCCGAACTCC TGCCGCGCCT GATCGGGAAC ATCCCCTTCA AGAAGTCGAT GCGCTGGGCC GACTTCGACG TCCGCTTCGC CCGCCCCATC CACTGGATCG TGGCGCTCTT CGACGGCAAG GTGGTTCCCT TCTCCTTCGG CAACATCGAC AGCGGAAGCG CCTCGCGCGG CCACCGCTTC ATGGCCAATA CCTCCTTCCC GGTGCGCGAC CTGGCCCACT ACTTAGAGGA GTGCGAGCGC CATTTCGTCA TCCCCGACCC GAATAAGCGC AAAGAGATCA TCCGCGCCGA GATCGAGCGG GTGGCCAAGC AGGCCAAGGG GAACGTCCTT CCCGACGAGG CTCTCCTGGA GCAGGTGAGC TACCTGGTCG AGTACCCGAG CGCGGTGCAC GGCACCTTCT CACCCGATTT CCTGGTGGTG CCGCGCGAGG TGCTGATCAC CTCCATGCGC GAGCACCAGC GCTACTTCTC CCTGGTGGAC GATGAGGGGA AACTCCTCCC CGGCTTCATC ACCATCAACA ACACCATCAC CGAGGACCCG CAGGTGGTGG TCAAGGGGAA CGAGAGGGTG CTCCGCGCCC GCCTCTCCGA CGCCCGCTTC TTCTTCGACG AGGACCACAA GGTGAGGCTC GAAGCCCGCG TCGAGTCCCT GAAGAGCGTG GTGTACCAGG CGAAGCTCGG CACCTCCTAC GAGAAGATGG AGCGTTTCCG CGAGCTGGGC AAACGCCTGG CCCAGAGGCT GAACCCCGCC GTGACCAAAG AGGTCGAGCG CGCGGCGACG CTTTGCAAGG CGGATCTCGT CTCCGGCATG GTCGGGGAAT TCCCCGAGGT GCAGGGGATC ATGGGGCGCG AGTATGCGCT CCACGACGGC GAGGAGAAGG CTGTGGCCAA CGCCATCGCC GAGCACTACC TCCCGACCCA GGCAGGGGGC GAGCTTCCCG CCTCCGACAT CGGCGCCTTC GTCTCCTTGG CCGACAAGAT GGACACCATC TGCGGCTGCT TCTCGGTTGG GCTCATCCCC ACCGGTTCCG CCGACCCCTA CGCCCTCAGG CGTTCGGCGC TCGGCATCAT CAACATCATT CTGGACAAGG GGTACCGCGA GCCGCTCTCC GACTTCGTCA AGGCGTCGCT CGATCTCCTC TCCGCCAAGG CGACCCGGCC GCTTGCCGAG GTGCAAAAGG ACGTCCTCGA CTTCTTCCGC GGGCGCTTCG TGAACCTGAT GGCGGACCGC TTCCCCTCCG ACGCGGTGGA GGCGGTGGTG TCGGTCTCCT TCGACGACCT GGTCGAGGCG GCAGCGAAGA TCGAGGCACT GGCAGGCTTC CGTAACCGCG ACGACTTCGG CCCCCTGGCC GTCGCCTTCA AAAGGGTCTG CAACATCGTC AAGGACGGGG TGGATACCCC GGTCTCGACC GAACTCTTCC AGGACGCCGC CGAAGGTGAA CTGCACCAGG CGCTGACGCA GGTCTCCGGC AAAGTGGCGG CAGCGCTCAA AAAGGCCGAC TACCTGGCGG CCCTGACCGA GATAGCGACG CTGAAGCCCG CCGTCGACCT CTTCTTCGAA AAGGTCATGG TCATGGCCGA GGACGAACGG GTGCGCCAGA ATCGCCTGGC GCTTCTCACC GGCATAGCGA GGCTCTTCGG AAGCCTGGCG GACTTCTCGA GGTTGTCGCC CTGA
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Protein sequence | MAKDLFLEIG CEEIPAGFVP KAMADMELLI KKEFDSARIE YGEIVTLGTP RRLVLAVKGV AERQPDAELT AMGPAKSHAY DADGNPTKAA QGFARGQGID VSQLKLVTTE KGEYLAAVKS EIGRATAELL PELLPRLIGN IPFKKSMRWA DFDVRFARPI HWIVALFDGK VVPFSFGNID SGSASRGHRF MANTSFPVRD LAHYLEECER HFVIPDPNKR KEIIRAEIER VAKQAKGNVL PDEALLEQVS YLVEYPSAVH GTFSPDFLVV PREVLITSMR EHQRYFSLVD DEGKLLPGFI TINNTITEDP QVVVKGNERV LRARLSDARF FFDEDHKVRL EARVESLKSV VYQAKLGTSY EKMERFRELG KRLAQRLNPA VTKEVERAAT LCKADLVSGM VGEFPEVQGI MGREYALHDG EEKAVANAIA EHYLPTQAGG ELPASDIGAF VSLADKMDTI CGCFSVGLIP TGSADPYALR RSALGIINII LDKGYREPLS DFVKASLDLL SAKATRPLAE VQKDVLDFFR GRFVNLMADR FPSDAVEAVV SVSFDDLVEA AAKIEALAGF RNRDDFGPLA VAFKRVCNIV KDGVDTPVST ELFQDAAEGE LHQALTQVSG KVAAALKKAD YLAALTEIAT LKPAVDLFFE KVMVMAEDER VRQNRLALLT GIARLFGSLA DFSRLSP
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