Gene Gbem_0642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0642 
SymbolglyS 
ID6783475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp762351 
End bp764414 
Gene Length2064 bp 
Protein Length687 aa 
Translation table11 
GC content65% 
IMG OID642766615 
Productglycyl-tRNA synthetase subunit beta 
Protein accessionYP_002137466 
Protein GI197117039 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0751] Glycyl-tRNA synthetase, beta subunit 
TIGRFAM ID[TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.91532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAGG ACCTGTTTCT GGAGATAGGT TGCGAAGAGA TCCCGGCCGG CTTCGTCCCC 
AAGGCGATGG CCGACATGGA GCTTTTGATC AAGAAAGAGT TCGACAGCGC CCGCATCGAG
TACGGCGAGA TCGTGACGCT CGGTACCCCG CGCCGCCTGG TGCTGGCCGT TAAGGGGGTC
GCCGAGAGGC AGCCTGACGC GGAACTGACC GCGATGGGGC CGGCCAAAAG CCACGCCTAC
GACGCCGACG GGAACCCCAC CAAGGCAGCC CAGGGCTTCG CCCGCGGCCA GGGAATCGAT
GTCTCGCAGC TGAAGCTCGT GACCACGGAG AAAGGCGAGT ATCTCGCCGC CGTGAAAAGC
GAGATAGGCC GCGCTACGGC AGAACTCCTC CCCGAACTCC TGCCGCGCCT GATCGGGAAC
ATCCCCTTCA AGAAGTCGAT GCGCTGGGCC GACTTCGACG TCCGCTTCGC CCGCCCCATC
CACTGGATCG TGGCGCTCTT CGACGGCAAG GTGGTTCCCT TCTCCTTCGG CAACATCGAC
AGCGGAAGCG CCTCGCGCGG CCACCGCTTC ATGGCCAATA CCTCCTTCCC GGTGCGCGAC
CTGGCCCACT ACTTAGAGGA GTGCGAGCGC CATTTCGTCA TCCCCGACCC GAATAAGCGC
AAAGAGATCA TCCGCGCCGA GATCGAGCGG GTGGCCAAGC AGGCCAAGGG GAACGTCCTT
CCCGACGAGG CTCTCCTGGA GCAGGTGAGC TACCTGGTCG AGTACCCGAG CGCGGTGCAC
GGCACCTTCT CACCCGATTT CCTGGTGGTG CCGCGCGAGG TGCTGATCAC CTCCATGCGC
GAGCACCAGC GCTACTTCTC CCTGGTGGAC GATGAGGGGA AACTCCTCCC CGGCTTCATC
ACCATCAACA ACACCATCAC CGAGGACCCG CAGGTGGTGG TCAAGGGGAA CGAGAGGGTG
CTCCGCGCCC GCCTCTCCGA CGCCCGCTTC TTCTTCGACG AGGACCACAA GGTGAGGCTC
GAAGCCCGCG TCGAGTCCCT GAAGAGCGTG GTGTACCAGG CGAAGCTCGG CACCTCCTAC
GAGAAGATGG AGCGTTTCCG CGAGCTGGGC AAACGCCTGG CCCAGAGGCT GAACCCCGCC
GTGACCAAAG AGGTCGAGCG CGCGGCGACG CTTTGCAAGG CGGATCTCGT CTCCGGCATG
GTCGGGGAAT TCCCCGAGGT GCAGGGGATC ATGGGGCGCG AGTATGCGCT CCACGACGGC
GAGGAGAAGG CTGTGGCCAA CGCCATCGCC GAGCACTACC TCCCGACCCA GGCAGGGGGC
GAGCTTCCCG CCTCCGACAT CGGCGCCTTC GTCTCCTTGG CCGACAAGAT GGACACCATC
TGCGGCTGCT TCTCGGTTGG GCTCATCCCC ACCGGTTCCG CCGACCCCTA CGCCCTCAGG
CGTTCGGCGC TCGGCATCAT CAACATCATT CTGGACAAGG GGTACCGCGA GCCGCTCTCC
GACTTCGTCA AGGCGTCGCT CGATCTCCTC TCCGCCAAGG CGACCCGGCC GCTTGCCGAG
GTGCAAAAGG ACGTCCTCGA CTTCTTCCGC GGGCGCTTCG TGAACCTGAT GGCGGACCGC
TTCCCCTCCG ACGCGGTGGA GGCGGTGGTG TCGGTCTCCT TCGACGACCT GGTCGAGGCG
GCAGCGAAGA TCGAGGCACT GGCAGGCTTC CGTAACCGCG ACGACTTCGG CCCCCTGGCC
GTCGCCTTCA AAAGGGTCTG CAACATCGTC AAGGACGGGG TGGATACCCC GGTCTCGACC
GAACTCTTCC AGGACGCCGC CGAAGGTGAA CTGCACCAGG CGCTGACGCA GGTCTCCGGC
AAAGTGGCGG CAGCGCTCAA AAAGGCCGAC TACCTGGCGG CCCTGACCGA GATAGCGACG
CTGAAGCCCG CCGTCGACCT CTTCTTCGAA AAGGTCATGG TCATGGCCGA GGACGAACGG
GTGCGCCAGA ATCGCCTGGC GCTTCTCACC GGCATAGCGA GGCTCTTCGG AAGCCTGGCG
GACTTCTCGA GGTTGTCGCC CTGA
 
Protein sequence
MAKDLFLEIG CEEIPAGFVP KAMADMELLI KKEFDSARIE YGEIVTLGTP RRLVLAVKGV 
AERQPDAELT AMGPAKSHAY DADGNPTKAA QGFARGQGID VSQLKLVTTE KGEYLAAVKS
EIGRATAELL PELLPRLIGN IPFKKSMRWA DFDVRFARPI HWIVALFDGK VVPFSFGNID
SGSASRGHRF MANTSFPVRD LAHYLEECER HFVIPDPNKR KEIIRAEIER VAKQAKGNVL
PDEALLEQVS YLVEYPSAVH GTFSPDFLVV PREVLITSMR EHQRYFSLVD DEGKLLPGFI
TINNTITEDP QVVVKGNERV LRARLSDARF FFDEDHKVRL EARVESLKSV VYQAKLGTSY
EKMERFRELG KRLAQRLNPA VTKEVERAAT LCKADLVSGM VGEFPEVQGI MGREYALHDG
EEKAVANAIA EHYLPTQAGG ELPASDIGAF VSLADKMDTI CGCFSVGLIP TGSADPYALR
RSALGIINII LDKGYREPLS DFVKASLDLL SAKATRPLAE VQKDVLDFFR GRFVNLMADR
FPSDAVEAVV SVSFDDLVEA AAKIEALAGF RNRDDFGPLA VAFKRVCNIV KDGVDTPVST
ELFQDAAEGE LHQALTQVSG KVAAALKKAD YLAALTEIAT LKPAVDLFFE KVMVMAEDER
VRQNRLALLT GIARLFGSLA DFSRLSP