| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0634 |
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| Symbol | |
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| ID | 6783467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 754441 |
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| End bp | 754959 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642766607 |
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| Product | peptide deformylase |
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| Protein accession | YP_002137458 |
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| Protein GI | 197117031 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00220243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATACGAA CAATACTCAC CTATCCGGAC CCTGAGCTGA AGAAGCGCTC ACTGCCGGTT
ACCGTTATCA CCGACAAGAC CCGCGAGTTG GCTCGCGACA TGGCCGAGAC CATGTACGAC
GCCCCCGGAG TGGGGCTTGC CGCCCCCCAG ATAGGGGTGC ACCAGCGCAT CATCGTCATC
GACGTCTCCG GCAAGGACGA GACGCCCGAG CTGATCGTGG CCATCAACCC CGAGATCGTC
CACGCCGAGG GGGAGGCGTT CGAGGAGGAA GGGTGCCTGT CGGTCCCCAA GTTCTCCGCC
AACGTGCGCC GGCACGCCCG CATCGTGGTG AAGGCGCTCA ACCTGGAGGG CGAGGAAGTG
ACCTTCCGCG CCGACGACCT CTTGTCCATC GCTTTCCAAC ACGAGATCGA CCACCTGGAC
GGCGTGCTCT TCATCGACCA TCTTTCCCCG CTCAAGAAAG GGATCTTCCG CAAGCGATAC
CAGCGCGCCT TGGACGAAGC AAAGGAGCTT AACCGATGA
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| Protein sequence | MIRTILTYPD PELKKRSLPV TVITDKTREL ARDMAETMYD APGVGLAAPQ IGVHQRIIVI
DVSGKDETPE LIVAINPEIV HAEGEAFEEE GCLSVPKFSA NVRRHARIVV KALNLEGEEV
TFRADDLLSI AFQHEIDHLD GVLFIDHLSP LKKGIFRKRY QRALDEAKEL NR
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