| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0627 |
|---|
| Symbol | |
|---|
| ID | 6783460 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 747558 |
|---|
| End bp | 748862 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642766600 |
|---|
| Product | aminotransferase |
|---|
| Protein accession | YP_002137451 |
|---|
| Protein GI | 197117024 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAACG AGATAGTCGC TCCCGGCGCG GGAGAACTTA CCTACGAGAT CAGGAACATC
GTTACGGTTG CCGAGAAGGT GCAACGCTTA GGGGTGAAGA TCAACTGGGA GAACATAGGC
GACCCCATCG TCAAGGGGGA GAACATCCCG CTCTGGATGA AGGAGATCGT GGCGGCCGAG
GCGATGAACG ACGACAGCTA CGCCTACTGC CCGACCCGCG GCGTCCTGGA GACCCGCGAG
TTCATCTGCG AGATCACCAA CAAGCGCGGG GGCGCGCAGA TCACCCCCGA CGACATAATC
TTCTTCAACG GCCTGGGCGA CGCCATCGCC AAGGTGTACG GCAACCTGCG CCCCGAAAGC
CGCGTGCTCA TGCCCTCCCC CACCTACACC ACCCACTCCA TCGGCGAGGC GGCCCACGCG
AACGCGGTGC CGGTCTGCTA CCGCTTGAAG CCCGAGGACA ACTGGTACCC GGACATGGAC
GACCTCGAGT GCCACGTGAA GTACAACCCG CAGATCGCCG GGATCATGAT GATCAACCCG
GACAACCCGA CCGGGATGGT GTACCCGGTG GAGGTGCTGA AGCAGATCGT CGAGATCGCG
AGGAAATACG ACCTCTTCAT CATCGCCGAC GAGGTGTACA GCAACATCGT CTACAACGGC
GAGAAGACGG TCCCCATCTC GGACGTAATC GGGCAGGTCC CCGCGATCGC AATGAAAGGG
ATCTCCAAGG AACTCCCGTG GCCCGGCTCC CGCTGCGGCT GGATCGAGGT GTACAACGCC
GACCGCGACC CGCGCTTCAA CAAGTTCGTC AACTCCATCC TCTCCTCCAA GATGAACGAG
GTCTGCTCCA CCACGCTGCC GCAGCGCTGC CTGCCGGCGG TGATGAAGCA CCCCGAGTAC
CACAACTACC TGAACGAGCG CATCACCCGC TACGAGAAGA TGAGCAACAT CACCTATGAG
GCGCTCTCGA AGGTGCCGGA GCTGGCCGTG AACCGCACCA ACGGCGCCTT CTACATGGCG
GTCCCCTTCA AGCCGGGGGT CCTGAACAAC ACCCAGACCC TCCCCATCAA GAACCCGGAG
ATCCGGCAGT TGGTCGAGGG GATCGTGAAC CAGCCGGGAG TGGCGCCGGA CAAGCGTTTC
GTCTATTACA TCCTGGCGCA CACGGGGATC TGCGTGGTTC CCCTCTCCTC CTTCAACACG
GAGCTCCTCG GGTTCAGGGT AACCCTCCTG GAGCGGGACG AGGCGGAGTG CCGCAGGATC
TACCGGACCC TCACCGAGAA CATCGCCACC TACCTCGCCT CCTAG
|
|---|
| Protein sequence | MRNEIVAPGA GELTYEIRNI VTVAEKVQRL GVKINWENIG DPIVKGENIP LWMKEIVAAE
AMNDDSYAYC PTRGVLETRE FICEITNKRG GAQITPDDII FFNGLGDAIA KVYGNLRPES
RVLMPSPTYT THSIGEAAHA NAVPVCYRLK PEDNWYPDMD DLECHVKYNP QIAGIMMINP
DNPTGMVYPV EVLKQIVEIA RKYDLFIIAD EVYSNIVYNG EKTVPISDVI GQVPAIAMKG
ISKELPWPGS RCGWIEVYNA DRDPRFNKFV NSILSSKMNE VCSTTLPQRC LPAVMKHPEY
HNYLNERITR YEKMSNITYE ALSKVPELAV NRTNGAFYMA VPFKPGVLNN TQTLPIKNPE
IRQLVEGIVN QPGVAPDKRF VYYILAHTGI CVVPLSSFNT ELLGFRVTLL ERDEAECRRI
YRTLTENIAT YLAS
|
|---|
| |