| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0622 |
|---|
| Symbol | |
|---|
| ID | 6783455 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 742520 |
|---|
| End bp | 744151 |
|---|
| Gene Length | 1632 bp |
|---|
| Protein Length | 543 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642766595 |
|---|
| Product | CheA signal transduction histidine kinase |
|---|
| Protein accession | YP_002137446 |
|---|
| Protein GI | 197117019 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACATGT CGCAGTACAA AAGCCTCTTC CTCTCCGAGA GCAGGGAGTA CCTGAAGACC
ATCTCCGACC AGGTGGTCGC CTTGGAGCAG GCTCCTGCCG AGAGAAGCGC CGTCGACGCC
CTCTTCAGGG GAGCCCATTC GCTCAAGGGG ATGGCCGCCT CTATGGAGTA CGGCGACGTC
GTGGTGGTGG CGCACAGCAT GGAAGACCTG ATGGCGCGGG TCCGGGACGG TGCCCTTTGC
TTCGAGGCCG GGGTGGCCGA TCTGCTCCTG GAGGGTGTGG ACCTGATCGA CGTCATGCTG
GCCGACGTGG AGGCGGACCG GGAATGCACC CGCCCTCCCG ACGACTTCGC GGAGAGGCTC
CGGGGTTACA CGCCGGCTCT CCCGAAAAAG CAAGCGCCCG CGGGGGAGCC CCCGGCGGAG
CACCCAGCGC CCCAGGCGGC GCAGCCGGGA GGCGAACCCG AGAAGGCCAA GGAGCCGGCC
GGCGAGGCGA GCGGCACGGT GCGGGTGAAG ACGGAGCTTC TGGATCACCT GATCAACCTG
ACCGGCGAGC TGGTCACCAA CAAGCACCGG CTGTTGAACG TGGCGCAGGA GGTGGCAAGC
CCCGCCTTGA ACGACGCGGT CTCCGAGACC GGGAAGCTTC TGCGCGCCCT GCACGACGAG
GTCATGAAGG TGCGCCTGAT GCCCTTCGAG GCGATCTGCG ACCGCTTCCA GCGCTCGGTC
CGAAGCCTCG CCAAGAAAAG CGGCAAGGAA ATCAACTTCG AGCTGTCCGG CCGCGAGATC
GGCATGGACC GCGGCATGCT GGAGCAGTTG GTCGATCCGC TGAACCACAT CCTGAGAAAC
GCCGTGGACC ACGGCATGGA GGAAAGCGCA GAGCGGGCGG CGCAGGGCAA GCCCCCCCGC
GGGACGGTGA AGCTCTCCGT TTCCCGCGAC CGTGACCGCA TATCGATCCA GGTAAGCGAC
GACGGCCGGG GGATGGAACC GCAGAAGATG ATTGAAGCGG CCGTCGCCAA GGGGGTGATC
ACCCCGGAAG AAGGGGCGCT CCTGTCGCCG CGCCAGGCGC TGATGCTCTC CTGCATCCCG
GGCTTCTCGA CCGCCAAGGT CGTCACCGAC ATCTCGGGGC GCGGCGTCGG CATGGACGCG
GTGAACGCGG CCATCCAGAA GCTTGGGGGA ACCCTGGTGA TAGAGAGCGA GCCCGGACAG
GGAAGCACCT TCACGCTCAG GCTCCCCATG ACCATCGCCA TCATCCACGC GCTGGTGGTG
CAGTGCGGCA ACGTGAAAGG GGCGGTCCCG GTGACGGGGG TGCTGCGCAC CGTCGAGCTG
GCGCGCCACC AGATCGAAAC CATGGGAAAG CGGCAGATGT TCCAGCTGGA CGGCGAGGCC
ATCCCGCTTT TGAGCCTGAA CCGGATACTG GGCCTGCCGC TGGGGCGTTT CCCCAACGGG
ATCCTGCCGC TCTTCGTCAC CGAGGCGAAG GGGAGGCGGG TCGGCATCGT GGTGGACCGC
TTTCTAGGGC AGCACGAACT CTTCGTAAAA CCTTTCGGCA GGCCTTTATG CAAGATGGCC
GGACTCGCCG GCGGGGCGAC GCTCGGGGAC GGAGAAATCG TCACCATCCT CGACCTGGCC
GGCCTGTTGT GA
|
|---|
| Protein sequence | MDMSQYKSLF LSESREYLKT ISDQVVALEQ APAERSAVDA LFRGAHSLKG MAASMEYGDV
VVVAHSMEDL MARVRDGALC FEAGVADLLL EGVDLIDVML ADVEADRECT RPPDDFAERL
RGYTPALPKK QAPAGEPPAE HPAPQAAQPG GEPEKAKEPA GEASGTVRVK TELLDHLINL
TGELVTNKHR LLNVAQEVAS PALNDAVSET GKLLRALHDE VMKVRLMPFE AICDRFQRSV
RSLAKKSGKE INFELSGREI GMDRGMLEQL VDPLNHILRN AVDHGMEESA ERAAQGKPPR
GTVKLSVSRD RDRISIQVSD DGRGMEPQKM IEAAVAKGVI TPEEGALLSP RQALMLSCIP
GFSTAKVVTD ISGRGVGMDA VNAAIQKLGG TLVIESEPGQ GSTFTLRLPM TIAIIHALVV
QCGNVKGAVP VTGVLRTVEL ARHQIETMGK RQMFQLDGEA IPLLSLNRIL GLPLGRFPNG
ILPLFVTEAK GRRVGIVVDR FLGQHELFVK PFGRPLCKMA GLAGGATLGD GEIVTILDLA
GLL
|
|---|
| |