Gene Gbem_0606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0606 
Symbol 
ID6783439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp728503 
End bp728901 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content64% 
IMG OID642766579 
Productprotein of unknown function UPF0047 
Protein accessionYP_002137430 
Protein GI197117003 
COG category[S] Function unknown 
COG ID[COG0432] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00149] secondary thiamine-phosphate synthase enzyme 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACATT ACCTGACGCT GAAGAGCAGG GAGAGGACCG AGCTGATCGA CATCACGGCG 
CGGGTGGAGG ATCTCATCGC CGCTTCCAGT ATCGGCAGCG GATGCTGCGA GATCTTTGTC
CTCCACACGA CGGCGGCCGT CACGGTCAAC GAAGGGGCCG ACCCGGCGGT CAAGCGCGAC
ATCAGCAACT GCCTGGACCG GCTGGTGCCG GACGCGCACT ACTTCACCCA CGCCGAAGGG
AACTCCGCGG CGCACGTGAA AGCGAGCATG ATCGGGAGCT CGGAGCGGCT CCTGGTGGAC
CGGGGGAAGC TTCTTTTGGG AACCTGGCAG GTGCTTTACT TCTGCGAGTT CGACGGCCCC
AGGGAGCGCC GCGTCGCGGT GAAAATCTGC GGCGAATAG
 
Protein sequence
MIHYLTLKSR ERTELIDITA RVEDLIAASS IGSGCCEIFV LHTTAAVTVN EGADPAVKRD 
ISNCLDRLVP DAHYFTHAEG NSAAHVKASM IGSSERLLVD RGKLLLGTWQ VLYFCEFDGP
RERRVAVKIC GE