| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0600 |
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| Symbol | |
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| ID | 6783433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 719436 |
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| End bp | 721619 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642766573 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_002137424 |
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| Protein GI | 197116997 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000188746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAAGA CGTTGAAATT GAAGAAGGGG CATGCGCTGT TGGCGGCCGG TCTCTCCCTG
CTGTTCTGGC TCGGGGACAC ATTTGTCGAC GCCTATGTGT TCGGGAGGAG GTCGTTCGTC
GACCAGCTAC TGGCCCCCGA GCCGTTCGAG ATATCCATGC GCATTTTCTA CGCCACCCTG
GCCGGTATCT TCTTCACCGG ACTTTTCCAG CTCTGGGAAA AGGGGCGCAA GGTGGAAACG
GCCCTGCGGC ATTCCGACGA TCTCTCCAAG ATCTTCTTCG GCTCCTCCCG CGACGCCATC
TGCGTGATCA AGACCGACAC CCTCTCCGTC TCCGACGCCA ACAGCGTTTT CGTGCAGAAA
TACGCGCTGA AGGACGCGCA GTCCGCCGGA AGCTTCCCCG AACTCCTTGC CCGCAACGGT
CTCACGGACC AGGTGCTGGG GCAGCTCGCG GCCTGCGCCG GGGGCGCCGC CCCGGTCAGC
TTCGAGATCA ACTACCGCGG GGCAGATGGC GGCACCTGTT ACGAGGAGGT CTCCATTCAC
CCGGTGGGCG AAATGCAGCA GGATGTGGAG ACGGTGCTCT ACGTGGCTAG GGACATCACG
GTGCGCAGGC GCTCGCAGGA GATGCTGGTG GCCTCGGAGG CGAGGTACCG CGCCATCTTC
GAGAACACCG GGACCGCGAT GGCCATCATA GAGCCGGGAG GGATGCTGCA GACGGTGAAC
CGCGGCTTCG AGGCGGCCAG CGGGTACAGC CGCAGCGAGA TCGAAGGGAA AAAGGTCTGG
ACCGATTTCG TCAAAAGCCC GGAGGGAGGC GTGCTCGACC GTGGAGCGGG CGCACAACGC
CGCACCTTCG AGGCGCTGCT GGAGGATAAA ACCGGCACGC AGCGCAGCAT GGCCGGTAAC
TGGGCGCCCG TCGACGGGAC CGAACAGGCT GTGCTGTCGC TGCTCGACAT CAGTGCGAAC
AAGGAGGCGG AGGAGGAGCT CAGGAAGAGC CGGGCCACCC TCGCCGTCGC CCAGCGCATC
GCCCGGCTCG GTAACTGGGA CTGGGACCTC TGCACCAACT CGCTCAACTG GTCCGAGGAG
ATGTACCGCA TTTTCGGGCT CGACCCGGCA GGATTCACCC CCACCTATGA CTGGTTCCTG
CAGGTGGTGC ACCCGCAGGA CCTGGAGCGC GTGGTTCGTT CGACGAACGA CGCGATCTAC
AACAGCAAGC CCTACCAGAT CGACTACCGT ATCTTGCTCC CAAGCGGCGC CGCGCGAACC
ATCTCGGCCA GCGCCGAGGT GACCTACGAC GCCCAGGGGA ACCCGCTGCA CATGGTGGGT
ACCAACCAGG ACATCACTTG GCGCATCGAA GCGGAAGAGG CGCTCAGGAG CTCTGAGGAG
AAGTTCTCCA AGGCTTTCCA CGCAAGCCCC GACTCCATCG TCATCACCCG CGCCGCGGAC
GGAACCTACA TCGACGTCAA CGAGGCGTTC CAGGTGATCA CCGGGTACTC GCGAGACGAG
GTGATCGGCA AGAGTTCCAC CGAGGTCGGG CTTTGGGCAG ACCCCGATGC GCGCATGGTG
ATGCTGAAGC TTTTGAACCA GCACGAGCAC GTACGCAACC TGGATGTCCG CTTCCGGGTG
AAATCGGGGG AAGTCCGGGA GATGATCTGG TCTGCGGACG TCATCGAGTA CGACGGGGAA
GCCTGCCTGA TCGCCATATC CCGCGACGTG ACGGACCAGA GGCAGATGGA GAAGGAGCTT
CTGGAGAGCG ACGCCCGCCT CTACATGAAG CACGAGGAGC TGAAGAACGT CTTTCACCAG
ATGGAGGTGA TCCGCCGCGA GTGGGAGGAG ATCATGGACT GCATCAGCGA CATGTTCATC
CTCGCCGACC AGTTCGGCAA GATCCGCAGG TTCAATCGCG CCGTGGAGAC CTTCACCGGC
AAGGCGCACC GCGACATCGT GGGGAGGGAC TGCGAAGCGT TCCTTAAAGA GCACGGCCTG
GGGGCGCACC TTGCATCGCC GGACCTGGAG TTGCTGCACA AGGAAACGGG CAAATGGTTC
GTGGTGAAGC GCCATGCCTT CCCGAACGCC GAAGTCGACG GCTCGTCGCG GGAGGTGGTT
ATCATTAACG AGACCACCAG CATACGGCGC AGGACGGGCC ATGAGGCGCC ACAAGCGGCA
ACAGAGGTTT CCGCTGCTAA TTAG
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| Protein sequence | MLKTLKLKKG HALLAAGLSL LFWLGDTFVD AYVFGRRSFV DQLLAPEPFE ISMRIFYATL
AGIFFTGLFQ LWEKGRKVET ALRHSDDLSK IFFGSSRDAI CVIKTDTLSV SDANSVFVQK
YALKDAQSAG SFPELLARNG LTDQVLGQLA ACAGGAAPVS FEINYRGADG GTCYEEVSIH
PVGEMQQDVE TVLYVARDIT VRRRSQEMLV ASEARYRAIF ENTGTAMAII EPGGMLQTVN
RGFEAASGYS RSEIEGKKVW TDFVKSPEGG VLDRGAGAQR RTFEALLEDK TGTQRSMAGN
WAPVDGTEQA VLSLLDISAN KEAEEELRKS RATLAVAQRI ARLGNWDWDL CTNSLNWSEE
MYRIFGLDPA GFTPTYDWFL QVVHPQDLER VVRSTNDAIY NSKPYQIDYR ILLPSGAART
ISASAEVTYD AQGNPLHMVG TNQDITWRIE AEEALRSSEE KFSKAFHASP DSIVITRAAD
GTYIDVNEAF QVITGYSRDE VIGKSSTEVG LWADPDARMV MLKLLNQHEH VRNLDVRFRV
KSGEVREMIW SADVIEYDGE ACLIAISRDV TDQRQMEKEL LESDARLYMK HEELKNVFHQ
MEVIRREWEE IMDCISDMFI LADQFGKIRR FNRAVETFTG KAHRDIVGRD CEAFLKEHGL
GAHLASPDLE LLHKETGKWF VVKRHAFPNA EVDGSSREVV IINETTSIRR RTGHEAPQAA
TEVSAAN
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