Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0578 |
Symbol | |
ID | 6783411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 699517 |
End bp | 700236 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642766551 |
Product | metallophosphoesterase |
Protein accession | YP_002137402 |
Protein GI | 197116975 |
COG category | [S] Function unknown |
COG ID | [COG2908] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01854] UDP-2,3-diacylglucosamine hydrolase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00264084 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCAAGA TCTTCATCGC CGATGCCCAC CTGAAAAGAC CGGAAGACGC CAACTACCGC ACCCTGGTCC GGTTCCTGGA GAACCTCCCC GCCGACACGG AGACGCTCTA TCTCCTGGGG GACATCTTCG AGTTCTGGAT CGGCAACCCA GAGCCTGTGT ACGGCCACTA CCGGGAGATC GTCGACTGCC TGAAGCAGGT GAGGGGGCGC GGCGTGCGCA TCGTCTACTT CGAAGGGAAC CATGATTTCC ATCTGGACCG CTTCTTCGGG GAAAAACTGC AGGCAGAGGT TCATCGCGCC GGAGCGTTGC TGGAAATCGG GGGGCAGAAG GTCTATGTGT GCCACGGCGA CGAGATCAAC CGCGAGGATT ACCGCTATCG CGCCTTCCGG CTGCTGCTGC ATAACCCCGT GGTAAAGGCG CTGGTCCCCA TCTTCTCCAG GAGGATCGCG GACCACGCGG CGGCGGTGCT GTCGCGCCGC TCCAGCAGCA AGCACTCCTT ACGCGAAAAG CGCTGGGACT ACCGGGTCAT CCTCGATTCC TTCGCCCGCA ACCGCTTCGC CTCGGGGTGC GACGCGGTCA TCACCGGCCA TTACCACCTT CCCATGATAA AGCGGGAGCC GGGGCGCCTT TTCATCTCTT TGGGCGACTG GATCACCCAC TATTCCTACG CGCAGTGGCT GGACGGCGAG TTCACCCTGG AGAGTTACCG GGAGAACTAG
|
Protein sequence | MRKIFIADAH LKRPEDANYR TLVRFLENLP ADTETLYLLG DIFEFWIGNP EPVYGHYREI VDCLKQVRGR GVRIVYFEGN HDFHLDRFFG EKLQAEVHRA GALLEIGGQK VYVCHGDEIN REDYRYRAFR LLLHNPVVKA LVPIFSRRIA DHAAAVLSRR SSSKHSLREK RWDYRVILDS FARNRFASGC DAVITGHYHL PMIKREPGRL FISLGDWITH YSYAQWLDGE FTLESYREN
|
| |