| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0574 |
|---|
| Symbol | |
|---|
| ID | 6783407 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 697150 |
|---|
| End bp | 697731 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642766547 |
|---|
| Product | membrane protein |
|---|
| Protein accession | YP_002137398 |
|---|
| Protein GI | 197116971 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0344] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000985335 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAACGAGA CATTGCTCCT GGTAGGCGCC TACCTCCTTG GCTCGGTACC GACCGGCCTG
CTCCTGGCGA AGAGCATGGG GGTGGACATC AGGGAGGCCG GCAGCGGCAA CATCGGCGCC
ACCAACGTCT ACCGGACCAT CGGCCGCAAG CTCGGCATAC TGACTCTACT TGGGGACTGC
CTGAAAGGGC TCGTCCCTGT GCTCGTCGCC AGGTGGCTGG GGCTCCCAGA TCTCTGGATC
GCGGCCGCGG GCCTCTGCGC TTTCCTGGGG CACGTCTACA CCATCTTCCT CGGGTTCAAG
GGGGGTAAGG GGGTGGCCAC AGCTCTGGGA GTATTCCTCG GCACCTCCCC CCTTTCGGTT
CTCTTCGGCA TCGTCATTTT CGGTTCGGTG CTCTACAAGT GGCGCTACGT CTCTCTAGCC
TCCATCACGG CGGCGGCGCT GATTCCGGTA CTGGTGTGGG CCACCGGCGG GAGCGTGAAG
CTGGTGCTCA TGGCCGTCGT CATCGCCTGC ATCGTCATCT TCAAGCACCG CGAGAATATC
GCGAGACTCA CGGCCGGGAC GGAGAACAAG TTCAAGGCTT AA
|
|---|
| Protein sequence | MNETLLLVGA YLLGSVPTGL LLAKSMGVDI REAGSGNIGA TNVYRTIGRK LGILTLLGDC
LKGLVPVLVA RWLGLPDLWI AAAGLCAFLG HVYTIFLGFK GGKGVATALG VFLGTSPLSV
LFGIVIFGSV LYKWRYVSLA SITAAALIPV LVWATGGSVK LVLMAVVIAC IVIFKHRENI
ARLTAGTENK FKA
|
|---|
| |