Gene Gbem_0558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0558 
Symbol 
ID6783391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand- 
Start bp671567 
End bp671980 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content57% 
IMG OID642766532 
Productmethylmalonyl-CoA epimerase 
Protein accessionYP_002137383 
Protein GI197116956 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins 
TIGRFAM ID[TIGR03081] methylmalonyl-CoA epimerase 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.000000000977172 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTATCTA AGATAAATCA TGTCGGCGTT GCAGTCGCTT CTCTTGAGGA AGCACTTCCT 
TTTTATCGCG ATTCACTGGG CATGACTTTC TCTGGTACAG AAGAGGTCCC AAGTCAACTA 
GTACGGGTAG CTTTTCTGTC AGTAGGCGAA TCGAAGATCG AACTTCTGGA GCCGACCTCC 
CCCGAGAGTC CGGTGACCAA GTTCCTGGAG AAGAACGGCC CGGGGGTGCA CCACGTGGCT 
TACGGGGTTG ACGATATCGA GGCGGCTATC GCAGCGCTGG TGGCCAAAGG GACCCGCATG 
ATCGACGCCG TACCCCGCAA CGGCGCCCAC GGCGCGCGTA TCGCCTTCAT CCATCCCAAG 
AGCAGCGGCG GCGTGCTGAC GGAACTGTGT GAAGTGCACG ACCACAGTCA TTGA
 
Protein sequence
MLSKINHVGV AVASLEEALP FYRDSLGMTF SGTEEVPSQL VRVAFLSVGE SKIELLEPTS 
PESPVTKFLE KNGPGVHHVA YGVDDIEAAI AALVAKGTRM IDAVPRNGAH GARIAFIHPK 
SSGGVLTELC EVHDHSH