| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0550 |
|---|
| Symbol | |
|---|
| ID | 6783379 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 662805 |
|---|
| End bp | 663461 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642766520 |
|---|
| Product | isoprenoid biosynthesis protein with amidotransferase-like domain |
|---|
| Protein accession | YP_002137375 |
|---|
| Protein GI | 197116948 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3155] Uncharacterized protein involved in an early stage of isoprenoid biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000055429 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGGA TAGGCGTGGT ACTTTCCGGC TGCGGAGTGC GTGACGGCAG CGAGATACAC
GAGGCGGTGC TGGCACTTTT GGCGATTGAC AGAAGCGGCG CCAAGGCCGT CTGCCTCGCA
CCCGATATCG ACTGCGACGA AGTGAACCAC CTGACCATGC AGGAAACCGG CGCCAAGAGG
AAGGTCCTGG TGGAGTCGGC CCGCATCGCC CGCGGCGAGG TGAGCGACGT TAAGAATGCC
AAGGCATCCG ACCTCGACGC CGTCGTTTTC CCCGGCGGCT TCGGCGCCGC CAAGAACCTG
TGCAACTTCG GCCAAAAGGG GGCCGACGGG ATGGTGCAAC CCGACGTGCT CAGGCTGGTA
AGGGAGATGT CGGCGGCGAA GAAGCCGATC TGCGCCATCT GCATCGCACC TTCGGTAGTG
GCGCTGGCGC TGGGGAAGGA GCTCTCCCCC CGGCTCACCA TAGGTAACGA CCCTGGCACC
GCCGGGGCGA TTTCCGCCAC CGGCAGCAAG CACGTCGACT GCCCCGCAGA CGAGATCGTA
GTGGACCGGG AAAACCTGAT CGTGTCGACC CCGGCCTACA TGCTGGCCGG CAGCATATCC
GAGGCCGCCA GGGGGATCGA GAAGGCGGTG CAGGCGACCC TGGAACTGAT AAAGTAG
|
|---|
| Protein sequence | MKRIGVVLSG CGVRDGSEIH EAVLALLAID RSGAKAVCLA PDIDCDEVNH LTMQETGAKR
KVLVESARIA RGEVSDVKNA KASDLDAVVF PGGFGAAKNL CNFGQKGADG MVQPDVLRLV
REMSAAKKPI CAICIAPSVV ALALGKELSP RLTIGNDPGT AGAISATGSK HVDCPADEIV
VDRENLIVST PAYMLAGSIS EAARGIEKAV QATLELIK
|
|---|
| |