Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0531 |
Symbol | |
ID | 6783360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 640062 |
End bp | 640871 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642766501 |
Product | collagen triple helix repeat |
Protein accession | YP_002137356 |
Protein GI | 197116929 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.288675 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGAAGCG TGAGAAGGGC GTTGTTTACA GTGATAGCCA TGGCAGGCCT GATGGGATTG GTGACAGGTA CAGGCTACGC CGCCGGAACC AAACATTCCG GTACGCACCA CAAAGCCGGG ACCATGAGCA AAACTTCCAA GACGCACCAC AAAACAATGA CTCACAAAAC AGGCAGCGCC AGAGGGACTG CTGGTGGTGG CCTGACAGAA TCCAGCATGC CAAGCGGTGT GGGAGCACAT TCCACCACCA GGCAGGATTT CAGCGTGGAA AAAGTGGGGC CGGAAACGGG TAGCGGCGGC GCAATGGGTA CCGGTGCCGG CGGAAACGTC GGTACTAGCG GAACTATGCA AAGAGGCACC GGCGGCACCT ACGACCAGGG TACTGGCGGC ACCATGCAAA GAGGCACCGG CGGCACCTAT GACCAGGGTA CCGGCGACAC TATGCAAAGA GGCACCGGCG GCACTTATGA CCAGGGTACC GGCGGCACCA TGCAAAGAGG CACCGGCGGG ACCTATGACC AGGGCACCGG CGGCACCATG CAAAGAGGCA CCGGCGGAAC CTATGACCAG GGTACTGGCG GCACCATGCA AAGAGGAACC GGTGGAACTT ATGACCAGGG TACCGGTAGT ATGGGGACCG GTGGAACCAC AGGAACTGGC AGCATGGGCA CTGGCGGAAC AACCGGCACC GGCAGCGGCG GCAGCATGGG TACTGGCGGA ACAACCGGCA CTGGCAGCGG CGGCAGCATG GGTACCGGCG GAACCACTGG CACTGGCAGC GGCGGCAGCA TGGGTACCGG CGGGAAGTAA
|
Protein sequence | MRSVRRALFT VIAMAGLMGL VTGTGYAAGT KHSGTHHKAG TMSKTSKTHH KTMTHKTGSA RGTAGGGLTE SSMPSGVGAH STTRQDFSVE KVGPETGSGG AMGTGAGGNV GTSGTMQRGT GGTYDQGTGG TMQRGTGGTY DQGTGDTMQR GTGGTYDQGT GGTMQRGTGG TYDQGTGGTM QRGTGGTYDQ GTGGTMQRGT GGTYDQGTGS MGTGGTTGTG SMGTGGTTGT GSGGSMGTGG TTGTGSGGSM GTGGTTGTGS GGSMGTGGK
|
| |