Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0517 |
Symbol | |
ID | 6783346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 624635 |
End bp | 627628 |
Gene Length | 2994 bp |
Protein Length | 997 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642766487 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_002137342 |
Protein GI | 197116915 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.660732 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTACGTC TTTCGTCTCT CTCAATCCGG TCACTTTTGC TGCTGATAAC ATGCATTGTG GCATTGCCTG CGGCGGTGAT AATCCTGTAC TCAGGGATCG AGTTTCGTAA CGCCATGCTT GGAGAAGCAC GAAAAGAGAC AGTCAAATTT GCAGAGATGA TAGTAAACGA ACAGCGGAAC CTCGTTGTGG CCGCCGAACA GTTGATGACG GCATTGGCGC AACTTCCAGA GGTGAAGGCG GGCGACACGG CGAAGGTCGA GTCGGTCCTG AAAGAGCTGC TCAAGTTGAA CCCGATGTAC GCAAATATCA CCATCGCCGA CTGCGAAGGC AAAGTTTGGG CCACCGCAGT CCCGACAGCC GTGCCGTACA ACCTCTCCGA CCGCTATTTT TTCAAGAGCA CCCTGGAAAC CGGAAAACTC TCCTCCGGCG AGTACGTCGT CAGCCGCATC ACCACCAAAC CCGTCTTCAA CTTGGGCTAC CCGGTAAGAG ACGACAGCGG CGCAATCGCC GGGGTCATCG GCGTCGCCTT CAATCTCGAG AACTACCGGC ATTTGTTGCA GCAGATGCGG TTGCCGGCCG GTTCCAGCTT CACCATCATA GATCATCGCG GCACCATCCT TGCCAGGGGA CTTACCGAGG GGAATTTTAC CGGGAAGGCT TACATAGCAG ATTCCTTCCG CAAAATGGTG GAGGGGCCGG ACGAAGGGGT GAGCACCAGG AAGGGGCTGG CAGGCGACAC GAGGATCATC GCCTACCGCA AGCTGTACCT CCCCGGGGAA AAGACCCCGT ACCTGTACGT TACCGCAGGC ATCCCCGTGG ACGCGGCAAC CCAGAAGGCC AACCGGGCGC TTATCCTGAG CGCGGTGCTT TTATCGTCAT TTCTGGCCAT TGCCTGCTTT TGTGCGGTGC TCATCGGCAA GCGCTGCATC GCCGACCGTT TGCAGCTTCT GGAAGACGCT TCCAGGCGGG TCGCCTCGGG GGACCTGCAC ATCCGCGTCT CCGAGGCGGT GACAGGAGGC GAACTCGGCA GCCTCGCCCA GACCCTGGAC GACATGGCGG ACCAGCTTCG TACCAGAACG GAAGCCCTGG CTCAGAGCAA GATCTTTATG AACACCATCA TCGAGACCGA GCCGGAATGC GTCAAACTCC TCGACGCGGA GGGGAGGGTG CAGATGATGA ACAGGACCGG CCTGAAGATG ATTGAGGCAG ACTCGCTGGC ACAGATCCAG GGGCAGTGTG TTTACCCGCT GATAGCTCCC GAACATCGGG ACGCGTTCAT TCAATTGACC CAGCGCGTCT TTGATGGCGT TGCCGGCAAC CTGGTCTTCG AGGTGCACGG CCTCAAGGGG GGGCATCTCT GGGTCGATAG CCATGCTGTC CCTTTTCGCA ATGACAAGGG GGAGATCGTA TCTCTTCTGG CCATCACCCG GGATGTCACT GAGCTTAGGA AATCGGAGGA GGAGCGTCGG AAGAATCTGC TGCTGTTCGA GTCTCTTATG CGGCACTCGC CGATGGGAAT CCGCATCTTT GAAGGGGGCT CGGGCAAATG CATCCTGCTT AACCAGGCCA CCGCCGATAT TTCGGGCGGC GACATGAAAA CGATGCAGGA GCAGAACTTC CGGGAATTAA AGTCATGGCG GGAAAGCGGC CTACTCGCCG CTGCGGAAAA GGTGCTCGCG GACGGCGTGG TTCGGTTAGT TGAGGCGGAT ATCTGCACGA GCTTCGGAAA ATCCGTGGTG ATGTCCTACA TCCTGTCCAG GCTCCTCATC AAGGAAAAGC AGCATCTCCT CGTCGTCGGC CGGGACGTGA CTGACGAAAA ACGGCTGACT GAAGAAAAGA AGAAAATGGA AGCCCAGATG CTGCACGTCC AGAAGCTGGA GAGCCTGGGG GTACTTGCCG GCGGCATCGC CCACGACTTC AACAACATTC TGATGTCGGT CATGGGGAAC GCGGAGTTGG CGCTTTTGAC TCTTCCCCCT GAATCTCCTG CCCGAACCAA CCTGCAGAAC ATCGAGATCT CTTCACAGCG TGCGGCTGAT TTGGCCAGGC AGATGCTGGC TTATTCCGGC AAAGGGAATT TCATCATCGA GAAGATCGAC GTCAACAGGC TGATAAACGA GATGAACCAC ATGCTGGAGG TCTCCATCTC TAAAAAAGTG GATGTCCGCT TCAATCTCGA CAGTGGTCTG CCGCTGGTGT CGGTCGATGC GACCCAGATC CGGCAGGTCA TCATGAACCT CGTCATCAAC GCTTCCGAAG CGATAGGCGA TCGCTGCGGA GTGATATCGA TCTCCACCGG CGCCATGGAG TGCGATGCCG CGTTTCTTTC CAAGTTGTGG CTGAACGACA CACTTAAGGA GGGAACCTAC CTCTACTTTG AGGTTGCCGA CGATGGGTGC GGCATGGATC AGGCTACCTT GGCCAAGATC TTCGACCCTT TCTTTACCAC CAAGTTCACG GGGCGGGGCC TCGGCATGGC TGCAGTCCTC GGCATCATAC GGGGGCACAA AGGGACTATC GAGGTTCACA GCGAACCAGG CAAAGGCTCC AGGTTCACCG TATTTTTGCC GGCTCTTCCT CCAGGCTCTG CACGTCCGGT GCAGGAGGCG GAAGCGGGTC CGCTGTCGCC GGGGTACGGC ACCATACTGT TGGTCGACGA CGAGGAGACC ATCCGCAACC TCGGCAACGA GATGCTCCAA ATTTTGGGAT ACCGCGTGCT TACTGCGGAA GACGGGTTGG TCGCTGTGGA GCTTTTCAAG GAGCACCACG GCGACATCAC CTGCGTCATT CTGGACCAGA CCATGCCGAA CCTGGACGGG GAACAGACCT TCCGCATCCT GCGCAGCATG GATCCGTCCA TCAAGGTGAT AATGTCCAGT GGTTTCACTG AACAGGACAT CGCCGAGAGG TTCATCGGAC GAGGCTTGGC GGGGTTCATA CAGAAACCGT ACAAGCTTGC CAGCTTAAGC AGGAAGCTTC AGGAACTGGG GTAA
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Protein sequence | MLRLSSLSIR SLLLLITCIV ALPAAVIILY SGIEFRNAML GEARKETVKF AEMIVNEQRN LVVAAEQLMT ALAQLPEVKA GDTAKVESVL KELLKLNPMY ANITIADCEG KVWATAVPTA VPYNLSDRYF FKSTLETGKL SSGEYVVSRI TTKPVFNLGY PVRDDSGAIA GVIGVAFNLE NYRHLLQQMR LPAGSSFTII DHRGTILARG LTEGNFTGKA YIADSFRKMV EGPDEGVSTR KGLAGDTRII AYRKLYLPGE KTPYLYVTAG IPVDAATQKA NRALILSAVL LSSFLAIACF CAVLIGKRCI ADRLQLLEDA SRRVASGDLH IRVSEAVTGG ELGSLAQTLD DMADQLRTRT EALAQSKIFM NTIIETEPEC VKLLDAEGRV QMMNRTGLKM IEADSLAQIQ GQCVYPLIAP EHRDAFIQLT QRVFDGVAGN LVFEVHGLKG GHLWVDSHAV PFRNDKGEIV SLLAITRDVT ELRKSEEERR KNLLLFESLM RHSPMGIRIF EGGSGKCILL NQATADISGG DMKTMQEQNF RELKSWRESG LLAAAEKVLA DGVVRLVEAD ICTSFGKSVV MSYILSRLLI KEKQHLLVVG RDVTDEKRLT EEKKKMEAQM LHVQKLESLG VLAGGIAHDF NNILMSVMGN AELALLTLPP ESPARTNLQN IEISSQRAAD LARQMLAYSG KGNFIIEKID VNRLINEMNH MLEVSISKKV DVRFNLDSGL PLVSVDATQI RQVIMNLVIN ASEAIGDRCG VISISTGAME CDAAFLSKLW LNDTLKEGTY LYFEVADDGC GMDQATLAKI FDPFFTTKFT GRGLGMAAVL GIIRGHKGTI EVHSEPGKGS RFTVFLPALP PGSARPVQEA EAGPLSPGYG TILLVDDEET IRNLGNEMLQ ILGYRVLTAE DGLVAVELFK EHHGDITCVI LDQTMPNLDG EQTFRILRSM DPSIKVIMSS GFTEQDIAER FIGRGLAGFI QKPYKLASLS RKLQELG
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