Gene Gbem_0517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0517 
Symbol 
ID6783346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp624635 
End bp627628 
Gene Length2994 bp 
Protein Length997 aa 
Translation table11 
GC content57% 
IMG OID642766487 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_002137342 
Protein GI197116915 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.660732 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTACGTC TTTCGTCTCT CTCAATCCGG TCACTTTTGC TGCTGATAAC ATGCATTGTG 
GCATTGCCTG CGGCGGTGAT AATCCTGTAC TCAGGGATCG AGTTTCGTAA CGCCATGCTT
GGAGAAGCAC GAAAAGAGAC AGTCAAATTT GCAGAGATGA TAGTAAACGA ACAGCGGAAC
CTCGTTGTGG CCGCCGAACA GTTGATGACG GCATTGGCGC AACTTCCAGA GGTGAAGGCG
GGCGACACGG CGAAGGTCGA GTCGGTCCTG AAAGAGCTGC TCAAGTTGAA CCCGATGTAC
GCAAATATCA CCATCGCCGA CTGCGAAGGC AAAGTTTGGG CCACCGCAGT CCCGACAGCC
GTGCCGTACA ACCTCTCCGA CCGCTATTTT TTCAAGAGCA CCCTGGAAAC CGGAAAACTC
TCCTCCGGCG AGTACGTCGT CAGCCGCATC ACCACCAAAC CCGTCTTCAA CTTGGGCTAC
CCGGTAAGAG ACGACAGCGG CGCAATCGCC GGGGTCATCG GCGTCGCCTT CAATCTCGAG
AACTACCGGC ATTTGTTGCA GCAGATGCGG TTGCCGGCCG GTTCCAGCTT CACCATCATA
GATCATCGCG GCACCATCCT TGCCAGGGGA CTTACCGAGG GGAATTTTAC CGGGAAGGCT
TACATAGCAG ATTCCTTCCG CAAAATGGTG GAGGGGCCGG ACGAAGGGGT GAGCACCAGG
AAGGGGCTGG CAGGCGACAC GAGGATCATC GCCTACCGCA AGCTGTACCT CCCCGGGGAA
AAGACCCCGT ACCTGTACGT TACCGCAGGC ATCCCCGTGG ACGCGGCAAC CCAGAAGGCC
AACCGGGCGC TTATCCTGAG CGCGGTGCTT TTATCGTCAT TTCTGGCCAT TGCCTGCTTT
TGTGCGGTGC TCATCGGCAA GCGCTGCATC GCCGACCGTT TGCAGCTTCT GGAAGACGCT
TCCAGGCGGG TCGCCTCGGG GGACCTGCAC ATCCGCGTCT CCGAGGCGGT GACAGGAGGC
GAACTCGGCA GCCTCGCCCA GACCCTGGAC GACATGGCGG ACCAGCTTCG TACCAGAACG
GAAGCCCTGG CTCAGAGCAA GATCTTTATG AACACCATCA TCGAGACCGA GCCGGAATGC
GTCAAACTCC TCGACGCGGA GGGGAGGGTG CAGATGATGA ACAGGACCGG CCTGAAGATG
ATTGAGGCAG ACTCGCTGGC ACAGATCCAG GGGCAGTGTG TTTACCCGCT GATAGCTCCC
GAACATCGGG ACGCGTTCAT TCAATTGACC CAGCGCGTCT TTGATGGCGT TGCCGGCAAC
CTGGTCTTCG AGGTGCACGG CCTCAAGGGG GGGCATCTCT GGGTCGATAG CCATGCTGTC
CCTTTTCGCA ATGACAAGGG GGAGATCGTA TCTCTTCTGG CCATCACCCG GGATGTCACT
GAGCTTAGGA AATCGGAGGA GGAGCGTCGG AAGAATCTGC TGCTGTTCGA GTCTCTTATG
CGGCACTCGC CGATGGGAAT CCGCATCTTT GAAGGGGGCT CGGGCAAATG CATCCTGCTT
AACCAGGCCA CCGCCGATAT TTCGGGCGGC GACATGAAAA CGATGCAGGA GCAGAACTTC
CGGGAATTAA AGTCATGGCG GGAAAGCGGC CTACTCGCCG CTGCGGAAAA GGTGCTCGCG
GACGGCGTGG TTCGGTTAGT TGAGGCGGAT ATCTGCACGA GCTTCGGAAA ATCCGTGGTG
ATGTCCTACA TCCTGTCCAG GCTCCTCATC AAGGAAAAGC AGCATCTCCT CGTCGTCGGC
CGGGACGTGA CTGACGAAAA ACGGCTGACT GAAGAAAAGA AGAAAATGGA AGCCCAGATG
CTGCACGTCC AGAAGCTGGA GAGCCTGGGG GTACTTGCCG GCGGCATCGC CCACGACTTC
AACAACATTC TGATGTCGGT CATGGGGAAC GCGGAGTTGG CGCTTTTGAC TCTTCCCCCT
GAATCTCCTG CCCGAACCAA CCTGCAGAAC ATCGAGATCT CTTCACAGCG TGCGGCTGAT
TTGGCCAGGC AGATGCTGGC TTATTCCGGC AAAGGGAATT TCATCATCGA GAAGATCGAC
GTCAACAGGC TGATAAACGA GATGAACCAC ATGCTGGAGG TCTCCATCTC TAAAAAAGTG
GATGTCCGCT TCAATCTCGA CAGTGGTCTG CCGCTGGTGT CGGTCGATGC GACCCAGATC
CGGCAGGTCA TCATGAACCT CGTCATCAAC GCTTCCGAAG CGATAGGCGA TCGCTGCGGA
GTGATATCGA TCTCCACCGG CGCCATGGAG TGCGATGCCG CGTTTCTTTC CAAGTTGTGG
CTGAACGACA CACTTAAGGA GGGAACCTAC CTCTACTTTG AGGTTGCCGA CGATGGGTGC
GGCATGGATC AGGCTACCTT GGCCAAGATC TTCGACCCTT TCTTTACCAC CAAGTTCACG
GGGCGGGGCC TCGGCATGGC TGCAGTCCTC GGCATCATAC GGGGGCACAA AGGGACTATC
GAGGTTCACA GCGAACCAGG CAAAGGCTCC AGGTTCACCG TATTTTTGCC GGCTCTTCCT
CCAGGCTCTG CACGTCCGGT GCAGGAGGCG GAAGCGGGTC CGCTGTCGCC GGGGTACGGC
ACCATACTGT TGGTCGACGA CGAGGAGACC ATCCGCAACC TCGGCAACGA GATGCTCCAA
ATTTTGGGAT ACCGCGTGCT TACTGCGGAA GACGGGTTGG TCGCTGTGGA GCTTTTCAAG
GAGCACCACG GCGACATCAC CTGCGTCATT CTGGACCAGA CCATGCCGAA CCTGGACGGG
GAACAGACCT TCCGCATCCT GCGCAGCATG GATCCGTCCA TCAAGGTGAT AATGTCCAGT
GGTTTCACTG AACAGGACAT CGCCGAGAGG TTCATCGGAC GAGGCTTGGC GGGGTTCATA
CAGAAACCGT ACAAGCTTGC CAGCTTAAGC AGGAAGCTTC AGGAACTGGG GTAA
 
Protein sequence
MLRLSSLSIR SLLLLITCIV ALPAAVIILY SGIEFRNAML GEARKETVKF AEMIVNEQRN 
LVVAAEQLMT ALAQLPEVKA GDTAKVESVL KELLKLNPMY ANITIADCEG KVWATAVPTA
VPYNLSDRYF FKSTLETGKL SSGEYVVSRI TTKPVFNLGY PVRDDSGAIA GVIGVAFNLE
NYRHLLQQMR LPAGSSFTII DHRGTILARG LTEGNFTGKA YIADSFRKMV EGPDEGVSTR
KGLAGDTRII AYRKLYLPGE KTPYLYVTAG IPVDAATQKA NRALILSAVL LSSFLAIACF
CAVLIGKRCI ADRLQLLEDA SRRVASGDLH IRVSEAVTGG ELGSLAQTLD DMADQLRTRT
EALAQSKIFM NTIIETEPEC VKLLDAEGRV QMMNRTGLKM IEADSLAQIQ GQCVYPLIAP
EHRDAFIQLT QRVFDGVAGN LVFEVHGLKG GHLWVDSHAV PFRNDKGEIV SLLAITRDVT
ELRKSEEERR KNLLLFESLM RHSPMGIRIF EGGSGKCILL NQATADISGG DMKTMQEQNF
RELKSWRESG LLAAAEKVLA DGVVRLVEAD ICTSFGKSVV MSYILSRLLI KEKQHLLVVG
RDVTDEKRLT EEKKKMEAQM LHVQKLESLG VLAGGIAHDF NNILMSVMGN AELALLTLPP
ESPARTNLQN IEISSQRAAD LARQMLAYSG KGNFIIEKID VNRLINEMNH MLEVSISKKV
DVRFNLDSGL PLVSVDATQI RQVIMNLVIN ASEAIGDRCG VISISTGAME CDAAFLSKLW
LNDTLKEGTY LYFEVADDGC GMDQATLAKI FDPFFTTKFT GRGLGMAAVL GIIRGHKGTI
EVHSEPGKGS RFTVFLPALP PGSARPVQEA EAGPLSPGYG TILLVDDEET IRNLGNEMLQ
ILGYRVLTAE DGLVAVELFK EHHGDITCVI LDQTMPNLDG EQTFRILRSM DPSIKVIMSS
GFTEQDIAER FIGRGLAGFI QKPYKLASLS RKLQELG