| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0499 |
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| Symbol | |
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| ID | 6783328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 603429 |
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| End bp | 606518 |
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| Gene Length | 3090 bp |
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| Protein Length | 1029 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642766469 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_002137324 |
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| Protein GI | 197116897 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCATCC ATCTTCACGC ACATTCTTCG CTCTCGCCCA ACTGGGGGGT GCACTCGCCT
GAGACGCTCT GCTCTCACGC GGCTTCCCTA GGCTTCAAGA CGCTCGCCAT CACGGACCGC
AACGGCCTCT ACGGTGTGCC GCGCTTCCTC GATGCGGCGC GGGAGGCGGG CATCTCGCCT
ATCATCGGCA CGGAGGCTGT TACACCAGAC AACCGGGCAG TCCTCCTTGC CTGCAACGAG
GAGGGGTACG CCAACATCTC CCGCCTCATC TCGGACTTGC ACTGCCAAAA GAATTTCGAC
CTCATCCCGG CACTTTCGGA GTACCGGCGC GGCATCATCG TGTTGAGCGA CGACCGGAAG
CTCCTGGCCG CTCTCAAACG GAAGTCGGAC GAGGGGCTGT TCGTGGAACT CTCGCCGGGA
CACTCCATGC ACAACGCTCT GACGCTGGCA AGGGATCTCA GGCTGCCGCC GGTGGCGACG
TCGAGGGCCG TGCTGCGCGC TCCGCGCTAC GGCGGACAGG CTCCTCCTTC GGACGCCCTC
ACCCCGACCT TCTCCCAGAG GGAGAGGGGG AATGGACCAA ACGCTCTAGC GGAGTGCAGG
CTCGACGATT TCCACCTGCA TCGGGTGCTG CGGGCGATTC ATTTGAACAC TAAGCTCTCG
CGACTTACGC CGGAGATGAC GGCGGCGGAG TCGGACGCGC TCTACCCGCC AGATAAGATG
GCTGAGTTCT TCCCGCATTG CCCTGAGGCG CTGCAAAATA CCATACGCAT CGCCTCGCTT
TGCAAAACGG ATTGGAATTT CTCCAGCACC ATCTTTCCCG CTTTCCGGGA GCTGGGGACG
GAGGCGGCAT TCGAAACGCT CCTGGAACGC GCTCGCCAAG GGGCAATCTG GCGCTACGGC
AGTATCTCCG ACCGGGTGCA GGCCCGCCTC GACAAGGAAC TCTCGATCAT CCGCGACAAG
GGGTTCTCTC ATTACTTCCT GGTGGTGGAG GAACTGACCA AACAGTCGGA AAGAACCTGC
GGCAGGGGGA GCGCGGCGGC GTCTCTGGTC GCCTATTGCC TCGGGATCAC ACATGTCGAC
CCCATCCGGC ACAACCTCTT CTTCGAACGC TTCCTGAACG AGGGGAGAAG CGATCCCCCC
GACATCGACG TAGATTTTCC CTGGGATGAG CGTGACGCCA TCCTCGACTT CGCCTTCGCG
CGTTACGGAG CCAGGCGGGC GGCCATGGTG GCGAACCAGG TGGGCTTCAA GGGGAGGTCG
GCGCTGCGCG AGGTGGCCAA GGTCTACGGC CTGCCGGACT ACGAGATCAA GGAGATGACG
GAGCGCATCT CTGGCTTTTG GCGCGCGGAG CAAAGCGCCG CTGCGATGAG CGGGCACCCG
CTCTTCAAGG GGGAGTCGCT TTCCTCGGAC TGGCAGGAGA TCATGTCGAC GGCCCGGCGC
CTGAACGGGC AGTTGCGCCA CCTGTCGCTG CATTGCGGAG GGCTAGTTAT CGTGCCCGAC
GAGATCCGCA AGTACGTCCC GGTGGAAATC TCGCACAAGG GGCTGCCGCT GATCCAGTGG
GAAAAGGACC AGACCGAGGA CGCGGGGCTG GTGAAGATCG ACATCCTGGG GAACCGCTCG
CTCGCCGTCA TCCGCGACGC AATGGCGGCG GTGAAGGAGC AGAAGGGTGT GGAGATCGAT
TACGCGACCT GGCGCCCGCT GGAGGATGAG AGGACGCAGA GCCTGCTGCG CCGCGGCCTC
ACCATCGGCT GTTTCTACCT GGAATCCCCT TCGGTGCGCC TGCTGCTGCG CAAGATCTGG
AGCAGCACCG CCCCGCCGGA GACCTTCCGG TACGACCTCT TCGAGGTGCT GGTGCAGGCG
TCGTCGATCA TCAGGCCCGC GGCGAACAGC TTCATTCAGG AGTACGTGGC GAGGCTCCAG
GGAAAGCCCT GGTCGCACCT GCATCCGCTT TTGGAGAGCG TACTGGGGGA GACGCTGGGG
ATAGCGATAT ACCAGGAGCA GATCACCCAG ATCGCCATGG AGCTCGCGGG TTTCTCCGCC
AGCGAAGGGG ACCAGCTCAG GAAGGTGATC ACCAAGAAGC ACCGCGAGAA GCGGCTGGCG
GATTTCCGCA ACAAGTTCAT GGCAGGGGGC GCGGAGCGCG GGGTCCCGGA AAAGGTGCTG
CTGGGAATCT GGGACCAGAT CCTCTCCTTC GCCGGCTATT CCTTCTGCAA ACCTCACTCG
GCGAGCTACG CGCTCTTGAG CGGGAAGGCA GCCTACATGA AGGCTCACCA CCCCGCGCAG
TTCATCGCGG CGGTGATTTC CAACCAGGGG GGGTACTACT CGCCGTTCGC CTACATCTCG
GAGGGGCGCA GGCTGGGGCT TGCCATCCTC CCCCCGGACA TCAACGAGAG TGAGTACCAC
TACACCGGCA AAGAGAAGAC CCTTAGGGTC GGCCTGATGC AGATCGACGG CCTGACCCGT
GACGGCGCGG ACCGGCTCTT AAAGGAGCGC CGGGAACGCG GGGCGTTCGC CTCTTTCAAG
GAGTTCCTGC GCCGGGCGCG GCTGCAGCGC GCCGATGCCG AGCGCCTGAT AAAAGCCGGC
TGCTTCGACG CGCTGGAGGG GGAGGAGAAG CGCCCGACGC TGCTTTGGGA GTTGCTCCAC
TTCCAGCAGC AGGCGACGGC CCTTTTGTTC GAACAAAAGA CCGAGCTGCC GCACCCTCCT
CCTTATGACG CGCAACTGGT GCTCAGGCAG GAGGTGGAAG CGCTCGGCTT CCTGGTGTCG
CGGCACCCGC TGGCGCTGTA CAAGGAGCAG TGGCAACGGC ACCGGCCGAT CAAGGCTTCG
GAATTGATCA AGCACACGGG AAAATGGGTG ACCATGGTGG GATGGTGGAT CACCACGAAG
ACGGTGGAGG ACAAGCACGG CAGGCCGATG GAATTTATCT CGTTCGAGGA TGTGACGGCG
ATCTTCGACG CCACCTTCTT TCCGGACGTC TACGCCAGGT TCTGCCGGAA GCTCTCGCAG
CGGCGCCCCT ACCTGCTCAA AGGGATAGTG GAAGAGGAGT TCGGAGTGGC GACGCTCAGG
GTGAAGTGGG TCGGTTTTCT GGACGGGTGA
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| Protein sequence | MFIHLHAHSS LSPNWGVHSP ETLCSHAASL GFKTLAITDR NGLYGVPRFL DAAREAGISP
IIGTEAVTPD NRAVLLACNE EGYANISRLI SDLHCQKNFD LIPALSEYRR GIIVLSDDRK
LLAALKRKSD EGLFVELSPG HSMHNALTLA RDLRLPPVAT SRAVLRAPRY GGQAPPSDAL
TPTFSQRERG NGPNALAECR LDDFHLHRVL RAIHLNTKLS RLTPEMTAAE SDALYPPDKM
AEFFPHCPEA LQNTIRIASL CKTDWNFSST IFPAFRELGT EAAFETLLER ARQGAIWRYG
SISDRVQARL DKELSIIRDK GFSHYFLVVE ELTKQSERTC GRGSAAASLV AYCLGITHVD
PIRHNLFFER FLNEGRSDPP DIDVDFPWDE RDAILDFAFA RYGARRAAMV ANQVGFKGRS
ALREVAKVYG LPDYEIKEMT ERISGFWRAE QSAAAMSGHP LFKGESLSSD WQEIMSTARR
LNGQLRHLSL HCGGLVIVPD EIRKYVPVEI SHKGLPLIQW EKDQTEDAGL VKIDILGNRS
LAVIRDAMAA VKEQKGVEID YATWRPLEDE RTQSLLRRGL TIGCFYLESP SVRLLLRKIW
SSTAPPETFR YDLFEVLVQA SSIIRPAANS FIQEYVARLQ GKPWSHLHPL LESVLGETLG
IAIYQEQITQ IAMELAGFSA SEGDQLRKVI TKKHREKRLA DFRNKFMAGG AERGVPEKVL
LGIWDQILSF AGYSFCKPHS ASYALLSGKA AYMKAHHPAQ FIAAVISNQG GYYSPFAYIS
EGRRLGLAIL PPDINESEYH YTGKEKTLRV GLMQIDGLTR DGADRLLKER RERGAFASFK
EFLRRARLQR ADAERLIKAG CFDALEGEEK RPTLLWELLH FQQQATALLF EQKTELPHPP
PYDAQLVLRQ EVEALGFLVS RHPLALYKEQ WQRHRPIKAS ELIKHTGKWV TMVGWWITTK
TVEDKHGRPM EFISFEDVTA IFDATFFPDV YARFCRKLSQ RRPYLLKGIV EEEFGVATLR
VKWVGFLDG
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