| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0494 |
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| Symbol | |
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| ID | 6783323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 596677 |
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| End bp | 597594 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642766464 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_002137319 |
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| Protein GI | 197116892 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.922593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGGTAG AGGAGCTGAA AAAGAAGAAG ATCGCGGTGC TGATGGGTGG ACTTTCCGCC
GAGCGCGAAG TGTCCCTCAA CAGCGGCAAG GCGGTCCTTG CCTCCCTGGT CAAGCAGGGT
TTCCGGGCGG TGGGGATCGA CGTCGGTCGC GACCTGCCGC AGCGGCTGGC CGAGGAGCAG
GTGGAATTGG CCTTCATCGC GCTGCACGGC CGCTTCGGCG AGGATGGCTC GGTCCAGGGA
CTCCTGGAAC TGATGGGCAT CCCCTATACC GGCTCCGGGG TACTTGCCAG CGCCCTCGCC
ATCGACAAAA TAGCTTCCAA GGTCATCTTC GCCTCCGCCG GGCTGAAGCT CGCTCCCTAC
CAGGTGCTGC GCCGGGGCGA GGAGCTCAAG CTAGCCAACC CGCTTCCGGT CGTGGTGAAG
CCTTCCCGCG AAGGCTCCTC CGTCGGAGTC GGCATCGTGC GCGACCCTTC CCGGATGCAG
GCGGCGCTCG ACGAGGCGTT CCGCTACGAC TCCGAGATCC TCATCGAGGG TTTCATCGAC
GGTCGCGAAG TCCAGGTCGG CATACTGAAC GGCAAGGCGC TGGGCGCCAT CGAGATCATC
CCCAAGGGGG AATTCTACGA CTACGAGGCG AAGTACACCG ACGGCGGCGC GCAGCACATC
CTGCCGGCGC GCCTCCCCGA GGCGGTCTAC GCCGAGGTGC TTCGTCAGGG TGAGAAGGCG
CACGCGGCGC TGGGGTGCGA CTGCTACAGC AGGGTCGACT TCCTGGTCAC CGAAACGGGC
GACTGCTTCC TCTTGGAGGT GAACACCCTC CCCGGGATGA CGGACTTAAG CCTTCTTCCC
GAGATAGCGG GGGGAGCCGG AATCGCTTTC GGCGAGTTGG TACTGCGCAT ACTGCAGGCG
GCATCGCTGA AGATCTAG
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| Protein sequence | MTVEELKKKK IAVLMGGLSA EREVSLNSGK AVLASLVKQG FRAVGIDVGR DLPQRLAEEQ
VELAFIALHG RFGEDGSVQG LLELMGIPYT GSGVLASALA IDKIASKVIF ASAGLKLAPY
QVLRRGEELK LANPLPVVVK PSREGSSVGV GIVRDPSRMQ AALDEAFRYD SEILIEGFID
GREVQVGILN GKALGAIEII PKGEFYDYEA KYTDGGAQHI LPARLPEAVY AEVLRQGEKA
HAALGCDCYS RVDFLVTETG DCFLLEVNTL PGMTDLSLLP EIAGGAGIAF GELVLRILQA
ASLKI
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