Gene Gbem_0474 details

Gene Information

• Locus tag: Gbem_0474
• ID: 6783301
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: +
• Start bp: 572881
• End bp: 574686
• Gene Length: 1806 bp
• Protein Length: 601 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 642766443
• Product: GTP-binding protein TypA
• Protein accession: YP_002137299
• Protein GI: 197116872
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGGAGA AGATCAGAAA CATAGCGATC ATCGCACACG TCGACCACGG CAAGACTACC 
CTGGTCGACG CGATGCTTAA GCAGTCCGGC GTATTCAGAG AAAACGAGGC GATCACCGAG 
AGGGTGATGG ATTCCAACGA CCTGGAGAAG GAACGCGGCA TCACCATCCT CGCCAAGAAC 
CTTTCCATCC ACCACGGCGG CTACAAGATC AACATCGTGG ATACCCCGGG CCACGCCGAT 
TTCGGCGGCG AGGTGGAGCG CGTGCTGAAG ATGGTCGACT CGGTGCTCTT GCTGGTGGAC 
GCCCTCGACG GCCCGATGCC GCAGACCCGC TTCGTGCTCA AGAAGTCGCT CGACCTGGGC 
CTTAAGCCGA TCGTCGTGAT CAACAAGGTC GACCGTCCCG GCGCCCGCCC CGCCGAGGTC 
GTGGACATGG TGTTCGACCT CTTCTGCGAA CTGCAGGCCT CCGACGCCCA GCTCGACTTC 
GCCATCTGCT ATACCAGCGC CAAGATGGGT TACGCCATGC GCGAAATGGA GCATCCCTCC 
GAGAACATGG AGCCGCTTTT CGAGCTGATC AAGGAAAACG TCCATCCTCC CGAGGGGGAC 
GCGGCCGCTC CCTTCCAGCT GCTGGTTACC AACATCGACT ACAACGACTA CATCGGCCGT 
ATCGCCACCG GGAAGATCTT CAACGGCAAG GTTAGCTCCG GCGAGACCGT CGCCCTCATC 
AAGCGCGACG GCACCATCTC CAAGGCGCGC GTCACCAAGC TCTTAGGGTA CGAGGGGCTG 
AAGCAGGTCG AGATCGCCGA GGCGTTCACC GGCGACATCG TCACCATCGC AGGGTTCACC 
GAAGTGGGTA TCGGCGAGAG CTTGGCTGCC GCCGACAACC CGATCCCGCT TCCCTACGTC 
GCCATCGACG AGCCGACCCT CTCCATGAAC TTCATCGTCA ACTCCTCCCC CTTCGCCGGG 
CGCGAGGGGA AGCTGGTCAC CTCCAGGAAC ATCCGCGAGC GCCTGGACCG GGAGCTTAGG 
ACCAACGTGT CGCTGCGGGT TTCCGACACC TCCAACGCCG ATACCTTCCA GGTCTCCGGC 
CGCGGCGAGC TGCACCTCTC CATCCTGATC GAGAACATGC GCCGTGAAGG TTTCGAGATG 
GCGGTCTCCA AACCCGAGGT CATCATGCGC ATGGTGAACG GCGTGCGCCA CGAGCCGATG 
GAATACCTGG TGGTGGACGT CCCCGCCGAG TACCAGGGGG CCATCATCGA GCGCATGGGA 
CCCCGTAAGG GGGAGATGGC AGCCATGACG CCGATGGGCG ATACCATCCG TCTTGAGTTC 
ATCGTTCCGG CCCGCGGCCT GATCGGCCTC AGGGGCGAGT TCCTCACCGA GACCCGCGGC 
ACCGCGGTGA TCACCCATAC CTTCCACGAG TACGCCCCCT ACAAAGGGGA GATCCCGGGC 
AGGAAGAACG GGGTGTTGAT CGCCATGGAG CAGGGGGAGA CAACTGCTTA CTCGCTGGAC 
GCGCTGCAGC CGCGCGGCAT CCTGTTCCTC GGCGCGGGCG TCGAGGTGTA CGGCGGCATG 
ATCGTAGGCC AGCACGCGAA GGACAACGAC CTCGAGGTGA ACCCCTGCAA GGGGAAGAAG 
CTCACCAACG TGCGCGCCTC GGGCTCCGAC GACGCCATCA AGCTCACTCC GCCGAGGCTG 
CTCACCCTGG AACAGGCGTT GGAGTTCATC GACGAAGACG AGCTGGTCGA GGTAACCCCT 
ATGTCCATAC GCCTCCGGAA GAAGTTTCTC GACCCCAACA TGCGCAAGCG CGCCAACCGC 
AGCTAG 

 

Protein sequence

MQEKIRNIAI IAHVDHGKTT LVDAMLKQSG VFRENEAITE RVMDSNDLEK ERGITILAKN 
LSIHHGGYKI NIVDTPGHAD FGGEVERVLK MVDSVLLLVD ALDGPMPQTR FVLKKSLDLG 
LKPIVVINKV DRPGARPAEV VDMVFDLFCE LQASDAQLDF AICYTSAKMG YAMREMEHPS 
ENMEPLFELI KENVHPPEGD AAAPFQLLVT NIDYNDYIGR IATGKIFNGK VSSGETVALI 
KRDGTISKAR VTKLLGYEGL KQVEIAEAFT GDIVTIAGFT EVGIGESLAA ADNPIPLPYV 
AIDEPTLSMN FIVNSSPFAG REGKLVTSRN IRERLDRELR TNVSLRVSDT SNADTFQVSG 
RGELHLSILI ENMRREGFEM AVSKPEVIMR MVNGVRHEPM EYLVVDVPAE YQGAIIERMG 
PRKGEMAAMT PMGDTIRLEF IVPARGLIGL RGEFLTETRG TAVITHTFHE YAPYKGEIPG 
RKNGVLIAME QGETTAYSLD ALQPRGILFL GAGVEVYGGM IVGQHAKDND LEVNPCKGKK 
LTNVRASGSD DAIKLTPPRL LTLEQALEFI DEDELVEVTP MSIRLRKKFL DPNMRKRANR 
S