Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0466 |
Symbol | |
ID | 6783293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 560086 |
End bp | 560529 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642766435 |
Product | putative PAS/PAC sensor protein |
Protein accession | YP_002137291 |
Protein GI | 197116864 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.98341 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATGAAT TACAGGACGA TGAACTGCAC CGGCAACTGG TGCAAGAGTG CAACGACGCC ATCATCTTCT CCGACCGGCA GGGGGTAATC AGGCTCTGGA ACAAGGGAGC CGAGCGGATG CTGGGGTTCA CTGCGGAGGA GGCGATCGGC CGCTCGCTGG ACATCTTCAT CCCGGAGAAC CAGCGCGCCC GCCACTGGGA AGGGTACTTC AGGGTGATGG AGACCGGCTA CACCCACTAT CAGACCGATC TCCTCGCGGC CCCCGCCCTG CGCAAGGACG GTACCCGCAT TTCGTCGGAA TTCTCCATGA CCATCATCAG GGACGCAGAC GGCCGGGTTG CCGGGACCGC AGCGGTGATG CGGGACGTAA CTGCCAAGTG GCAAAAGGAA AAGTCGCTGC GGGCGAGGGT TGCGGAGCTG GAAAAGGAAT TGGGCCAGAG CTGA
|
Protein sequence | MNELQDDELH RQLVQECNDA IIFSDRQGVI RLWNKGAERM LGFTAEEAIG RSLDIFIPEN QRARHWEGYF RVMETGYTHY QTDLLAAPAL RKDGTRISSE FSMTIIRDAD GRVAGTAAVM RDVTAKWQKE KSLRARVAEL EKELGQS
|
| |