Gene Gbem_0463 details

Gene Information

• Locus tag: Gbem_0463
• Symbol: upp
• ID: 6783290
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: +
• Start bp: 557183
• End bp: 557812
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 642766432
• Product: uracil phosphoribosyltransferase
• Protein accession: YP_002137288
• Protein GI: 197116861
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0035] Uracil phosphoribosyltransferase
• TIGRFAM ID: [TIGR01091] uracil phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.757412
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGTCC ACGAAGTAAA CCATCCGTTG GTGAAGCACA AGATCGGCCT GATGCGCGAG 
GCCGGGATCA GCACCAAGAA GTTCCGCGAA CTCACCTCGG AGATCGCCTG CCTGCTAGCT 
TACGAGGCCA GCAGGGATTT CCAGATCGAG CCTAGAACCA TCACCGGCTG GGACGGCAGC 
AAGGTAATGA TCCAGCAGTT GAAAGGGAAG AAGGTGACGG TGGTCCCGAT CCTGCGCGCC 
GGCATCGGCA TGCTGGACGG CGTACTGGAC ATGATCCCCA ACGCCAAGGT GAGCGTGGTG 
GGGCTGGCCC GCAACGAAGA GACGCTGGAG GCGCATACCT ATTTCGAGAG GTTCGTCGGG 
AGCCTGGACG AGCGTCTTGC CCTCATCATC GACCCCATGC TCGCTACCGG CGGGTCCATG 
GCCGCCACCA TAGAGATGCT CAAGAAGAAC GGCTGCCTCC AGATCCGCGT CCTTTGCCTC 
GTCGCCGCTC CGGAAGGACT GGCGAAGATC ACCGCTGCCT ACCCGGAGAT CGACATCTAC 
GTCGCGGCGA TCGACGAACG GTTGAACGAG CAAGGGTACA TCCTCCCTGG CTTGGGAGAC 
GCCGGCGACA AGATCTTCGG CACCAAGTAA 

 

Protein sequence

MSVHEVNHPL VKHKIGLMRE AGISTKKFRE LTSEIACLLA YEASRDFQIE PRTITGWDGS 
KVMIQQLKGK KVTVVPILRA GIGMLDGVLD MIPNAKVSVV GLARNEETLE AHTYFERFVG 
SLDERLALII DPMLATGGSM AATIEMLKKN GCLQIRVLCL VAAPEGLAKI TAAYPEIDIY 
VAAIDERLNE QGYILPGLGD AGDKIFGTK