| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0462 |
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| Symbol | |
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| ID | 6783289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 556298 |
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| End bp | 557014 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642766431 |
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| Product | Rhomboid family protein |
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| Protein accession | YP_002137287 |
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| Protein GI | 197116860 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.846794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCGCG GAGGGCTCGA TGCAGGCTTT GTGGTGCAGG CGATCATCGC TGCCAATGCG
CTCTTCTACC TACTCTCGCT GCTGGTGAGC GGCAGGCGCG GGTTCGACAT GAACCCCCTG
AGCTTCCTGT CGCCGGACCA GAACAGCTTG CTGCTGCTGG GCGCCACGGG CACGATACCG
GTGCTGGAGC TTGGGCGCGT CTGGAGCCTC ATCTCCGCCA ACTACCTGCA CGGGGGGCTG
CTGCACATCC TTTTCAACAT GATGGCGCTG CGCCAGATCG GCCCTTGGGT CAGTGCGGAG
TTCGGCGCGA GCCGCATGTT CGTCATCTAT ACCTTGAGCG GCGTTGCCGG CTACGTCGCC
TCCTTCTTTG CCGGGATCCC CTTCACCATC GGCGCTTCCG CCTCCGTCTG CGGCCTGATC
GGCGCCCTTT TCTATTTCGG CAAGAGCCGC GGCGGCAATT ACGGCGCGGC CGTCTCCCGC
GAGGTGAGCG GCTGGCTGAT CAGCCTGGTC CTCTTCGGCC TGATCATGCC CGGCATCAAC
AACTGGGGGC ATGGCGGCGG CGTAGTGGGG GGGATCGTGC TGGCGAAACT CCTGGGGTAC
CAGGAGCGGA GCCACGAGAA CAGCGCGCAC CGCCTGCTGG CGCTGATCTG CGTCGTCGCC
ACCGTGGCCG TCCTTTGCTA TGCCGCCTAT TTTTCCCTCG CCTACCGGTT CAGCTGA
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| Protein sequence | MLRGGLDAGF VVQAIIAANA LFYLLSLLVS GRRGFDMNPL SFLSPDQNSL LLLGATGTIP
VLELGRVWSL ISANYLHGGL LHILFNMMAL RQIGPWVSAE FGASRMFVIY TLSGVAGYVA
SFFAGIPFTI GASASVCGLI GALFYFGKSR GGNYGAAVSR EVSGWLISLV LFGLIMPGIN
NWGHGGGVVG GIVLAKLLGY QERSHENSAH RLLALICVVA TVAVLCYAAY FSLAYRFS
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