Gene Gbem_0458 details

Gene Information

• Locus tag: Gbem_0458
• ID: 6783285
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: +
• Start bp: 551515
• End bp: 552189
• Gene Length: 675 bp
• Protein Length: 224 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 642766427
• Product: SNARE associated Golgi protein
• Protein accession: YP_002137283
• Protein GI: 197116856
• COG category: [S] Function unknown
• COG ID: [COG0398] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACCTGA AAAAGATCCT CATACTTGTC GCTGCCGTCA TCGCAGTGGC GCTCTTCTTC 
TACCTCGACC TCGGCCGTTA CCTGACCCTG GAGTCGCTCA AGGCCAACCG GCAGGCGCTC 
ATCCAGTACT ACGCGGCGCA CCAGGCCGCC ACCGTCGCCG GGTTCATGGC ACTTTACATC 
CTGCAGACGG CGCTCTCGCT TCCCGGTGCA GCCATTCTGT CGCTCGCGGC AGGCGCCATC 
TTCGGCTCCC TCGCCGGGAC CTTCTACGCC GTCATGGCCG CAACAGTCGG AGCGACGCTC 
GCTTTCGTGG TGACACGCTA CCTGCTGCGC GACCTCGTGC TCGACAAGTT CGGACCGAAA 
CTGGAGGGGC TCAACCGGGA GCTGGAAACG CGCGGTTTCA ATTACCTGCT CTTTCTGAGG 
CTGGTGCCGC TGTTTCCCTT TTTCCTCATC AACCTCGCGG CCGGCCTCAC CCGGCTGCCG 
CTACGCGTCT TCGTCCCTGG GACGCTTATC GGGATCATCC CGGGAGGGTT CGTCTTCGTG 
AATGCCGGGG CGAGCCTCGC CACCATCAAC TCCCTCTCCG ACGTCGCCTC TCCCCGGGTG 
CTCGGTTCTT TCGCGCTCCT CGGGCTCTTC GCACTAGTCC CGGTGATCTA CGGGAAGATT 
AAAAAGAACG CCTAA 

 

Protein sequence

MNLKKILILV AAVIAVALFF YLDLGRYLTL ESLKANRQAL IQYYAAHQAA TVAGFMALYI 
LQTALSLPGA AILSLAAGAI FGSLAGTFYA VMAATVGATL AFVVTRYLLR DLVLDKFGPK 
LEGLNRELET RGFNYLLFLR LVPLFPFFLI NLAAGLTRLP LRVFVPGTLI GIIPGGFVFV 
NAGASLATIN SLSDVASPRV LGSFALLGLF ALVPVIYGKI KKNA