| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0450 |
|---|
| Symbol | |
|---|
| ID | 6783277 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 541868 |
|---|
| End bp | 544210 |
|---|
| Gene Length | 2343 bp |
|---|
| Protein Length | 780 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642766419 |
|---|
| Product | multi-sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_002137275 |
|---|
| Protein GI | 197116848 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCTTTG CCGAGCGGAT GAAAATCAGC TCCATCATGT TCTTCAGCCT GCTCGTTTTC
GGAGCGGCCG TCTTGTTCTG GTCCTCGCGG GAGTTGAACT CGGCCCGACA AAACGACGTG
CTGTCGGATG ACATCCAGAC CATCGTTTTC GAGCGTGCCA CGCTGCGCGA CGAGTTTTTC
CTCTACGGTC TGGAACGCGC CAGGGTGCAG TGGTTCGGCC TGAACCGCGA CGCGGAGGCG
TCGATCCGGC TGGGGAACGA GCATCTGCGC GCCCCGCAAG AGCGCGAGGT CCTGGAGAAG
GTGCAGGCGG ACCTCAGGGA ATCGGAGCTG GTTTCGCAGC GGCTGGTCGA GCTTTTGCGC
GGAAAGTCGG GCCCGGAGCT GGAGAGAGCG CACCACGACG AGTTGGCCAG CCGGCTCTAC
AGCCAGATCA TGCTTAAGGA TTCCGCCCTG CAGCAATCCT CGGCAGCCCT GCAGGAGTTG
ACCCGCCAGC GCTACAACAG GGCAAACTTT CGCACCATAT TCCTCACCTT CGCCTTCGTG
CTGTTGGTGG TCGCTGGGGG AAGGGCCAAT GCCTTTTTCA TCAATTCCCT TTTGCGCCGC
AGGCTGCAGC TCTTAAACGA AGGTGTGGCG AGGATCGCAG CGGGGGATTT CAGCCACAGG
ATGCAGTGCC GGGGAAGCGA CGAACTTGCG CTTTTTGCCG GGGTATTCAA CTGCGTTCTC
GACAAGGTCC AGGACTACAC CGGGCAGCTG GAAAAAAGCC ACGACCTGTT GAGCGGCCTC
TCCAGCCAGG TCCCCGGCAT ACTGTTCCAG GCCTGCCTCA CCCCGGATGG CCTCTTCAGT
ACCCCCTACG TGAGCAGGGG GGGGGACGAG CTCAATCAGG GCGACGCAGC GGCGCCTCTC
CAGGAGCCTG CCCAGCTCTT CGAGAGGTTA CACCCCGAGA AGTACCAGGC CATACTGGGG
ACCTTTCGGC GATCGGCCGA GACGCTTGAG CCTTGGGAGC ACGAGTTCCG CATCGATGTC
CCGGACAGGG GAATGCGGTG GCTGCGCGGG CAGGCGCGCC CCATGCGGCT TCCCGACGGC
GGCACCCTCT GGCACGGGTT CATCTCGGAC ATAACCGAGA GGAAACGGGC TGAGGAGGCG
CTGCACCGAA GCGAGAGCCG CTACCGGATG CAGCTGCAGG AATTGACCAA CATCTACACC
CACACTGCCG TCGGCCTCTT CGCCGTGGAC CGCGAGATGC GCTATCTGCG CCTCAACGAG
CAGATGGCCG GCTACAACTG CAGGCCCATG GACGAGCATG TCGGCAGAAC CATCGACGAG
GTGCACCCCC CGGCGTTCGT GGTCGCCCTC AAGGAGATGT GGCGCCCGGT CCTGGAACGG
GGCGAATCCC TGCTGAACCT GGAGGTCCAG GGGCAAGCGG ATTGGCCCAG CGGGGAGCGC
CATTGGCTGG TGAGCTTCCA GCCCCTGTTC GCTGAGACCG GCGCGGTCAT CGGCCTCACC
GGATCGGTGA TGGATATAAC CGAGCGCAAG GTCGCCGAGC AGGTACTTTT GGGGGCGAGG
CAGCAACTGG AGCGGGAGGT GCAGCTTAGG ACGGCGAAAC TTTCCCTGAC CAACAAGCAT
CTGATCCAGG AGATCGAGGT GCGCAAGAAG GTTGAGGTCG AACTCCTGGC CCAGCAGCAG
AAGCTGCAAG AGATGGCATT CGAGATCTCG ATGGCGGAGG AGCGGGAGCG CGACCGCATC
GCGAGCGAAC TGCACGACCA GGTGGGGCAG CGCCTGATCC TCGCCAAGAT CAAGCTGGAC
TCCCTGGCGA GCAACCTTCC CCTGGGGGAG TGCGAGGCGG AGGCAATGGG GGTCGAGACC
CTGATCGAGC AGACCCTTCA GGACATCCGG TCGCTCACCT TTCAGATCCG TCCCCCCGTT
TTGGCCACCG CCGGCCTGGA AGCCGCGCTG CGCTGGCTGG GGGAGGAACT GCACGCCGAC
TTCGGTCTGG AAGTGGAGTT CAGCGACGAC GGCAAGGACA AACCGCTCCG CTACGAGGTG
CGCTCCACCG TGTTCCAGGC GGTCCGCGAG TTGCTGCTCA ACGTGGCCAA GCACGCTGGG
ACCAAGAAAT GCCGGGTGCG CTTCACCCGG GTCGGGGACC GCATCGTGAT CGAGGTGGAG
GATGACGGGA CAGGCCTCAA GCCAGGCGCC GGCGACGGCA CCCGTTCCAG AAGCGGCGGG
TTCGGGCTGT TGAATGTTCA GCAGAAGGTA GAGCATCTCG GCGGGGTGTT CAGCATAGAG
TCCAGGCCGC AGGGAGGCAC CAGGGCTGCC ATCGAGGTTC CCGTGGAAAC CGAGACAAAA
TAG
|
|---|
| Protein sequence | MTFAERMKIS SIMFFSLLVF GAAVLFWSSR ELNSARQNDV LSDDIQTIVF ERATLRDEFF
LYGLERARVQ WFGLNRDAEA SIRLGNEHLR APQEREVLEK VQADLRESEL VSQRLVELLR
GKSGPELERA HHDELASRLY SQIMLKDSAL QQSSAALQEL TRQRYNRANF RTIFLTFAFV
LLVVAGGRAN AFFINSLLRR RLQLLNEGVA RIAAGDFSHR MQCRGSDELA LFAGVFNCVL
DKVQDYTGQL EKSHDLLSGL SSQVPGILFQ ACLTPDGLFS TPYVSRGGDE LNQGDAAAPL
QEPAQLFERL HPEKYQAILG TFRRSAETLE PWEHEFRIDV PDRGMRWLRG QARPMRLPDG
GTLWHGFISD ITERKRAEEA LHRSESRYRM QLQELTNIYT HTAVGLFAVD REMRYLRLNE
QMAGYNCRPM DEHVGRTIDE VHPPAFVVAL KEMWRPVLER GESLLNLEVQ GQADWPSGER
HWLVSFQPLF AETGAVIGLT GSVMDITERK VAEQVLLGAR QQLEREVQLR TAKLSLTNKH
LIQEIEVRKK VEVELLAQQQ KLQEMAFEIS MAEERERDRI ASELHDQVGQ RLILAKIKLD
SLASNLPLGE CEAEAMGVET LIEQTLQDIR SLTFQIRPPV LATAGLEAAL RWLGEELHAD
FGLEVEFSDD GKDKPLRYEV RSTVFQAVRE LLLNVAKHAG TKKCRVRFTR VGDRIVIEVE
DDGTGLKPGA GDGTRSRSGG FGLLNVQQKV EHLGGVFSIE SRPQGGTRAA IEVPVETETK
|
|---|
| |