Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0406 |
Symbol | |
ID | 6783232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 481564 |
End bp | 482379 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642766374 |
Product | cytochrome c-type biogenesis protein CcsB |
Protein accession | YP_002137231 |
Protein GI | 197116804 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
TIGRFAM ID | [TIGR03144] cytochrome c-type biogenesis protein CcsB |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0600631 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGCCT TGCTTTTCAA CAGCACCCTG GTCATCTACG CAGTAGCCAC CGTCATCTAC CTTGCCTACC TGGTCAAGCC CAAGCAATCC CTCGGACGCG CCGGTTTCTG GCTGACCGTG GCAGGCTTCG TTGTGCATTT AGGCTTCACG CTGAACCGCT TCCTCGAAGC GGGGCACACC CCGATCACCA ATCTCCACGA ATCGCTTTCC TTCTTCAGCA TGGCCACGGT CGGCATCTTC ATTATGTTCG AGAGGCGCTA CAAGGCGTCC ATCCTCGGCT CGTTCGTCAT GCCGCTGGCG CTTTTGATCC TGGCGATCTC GGCGACCTTC TCGGCCGTCA TCCCGCCGCT GAACCCCGCG CTCAAGAGCA AGTGGCTCGC CATCCATACC ATCATGGCCT TCCTCGGGTA CGCGGCCTTC GCCATCTCCT TCGGCGTCAG CGTCATGTAC CTGATCCAGT CGCACTTCCT GAAGAAGCGC CGGCTCGGGC CGATGTTCCA GAAGCTGCCG CCGCTCGACA TGCTGGACGA CATCAGCTAC CGCTGCCTTA CCTTCGGCTT CCCGCTGCTG ACCTTCGCCA TCATCTCCGG CGCCATCTGG GCCGAAACCG CGTGGGGCAC CTACTGGAGC TGGGACCCCA AGGAAACCTG GTCGCTCATC ACCTGGTTCA TCTACGCGGC GCTTCTCCAC GGCCGGCTCA CTACCGGCTG GCGCGGCAGG AAAGCTGCCA TGCTTTCCAT TTTCGGATTT GTCATCATGC TCTTCACCTT CCTCGGCGTG AATCTTCTCC TGTCGGGGCT GCACAGCTAC AAGTAA
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Protein sequence | MNALLFNSTL VIYAVATVIY LAYLVKPKQS LGRAGFWLTV AGFVVHLGFT LNRFLEAGHT PITNLHESLS FFSMATVGIF IMFERRYKAS ILGSFVMPLA LLILAISATF SAVIPPLNPA LKSKWLAIHT IMAFLGYAAF AISFGVSVMY LIQSHFLKKR RLGPMFQKLP PLDMLDDISY RCLTFGFPLL TFAIISGAIW AETAWGTYWS WDPKETWSLI TWFIYAALLH GRLTTGWRGR KAAMLSIFGF VIMLFTFLGV NLLLSGLHSY K
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