Gene Gbem_0406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0406 
Symbol 
ID6783232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp481564 
End bp482379 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content60% 
IMG OID642766374 
Productcytochrome c-type biogenesis protein CcsB 
Protein accessionYP_002137231 
Protein GI197116804 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component 
TIGRFAM ID[TIGR03144] cytochrome c-type biogenesis protein CcsB 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0600631 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCCT TGCTTTTCAA CAGCACCCTG GTCATCTACG CAGTAGCCAC CGTCATCTAC 
CTTGCCTACC TGGTCAAGCC CAAGCAATCC CTCGGACGCG CCGGTTTCTG GCTGACCGTG
GCAGGCTTCG TTGTGCATTT AGGCTTCACG CTGAACCGCT TCCTCGAAGC GGGGCACACC
CCGATCACCA ATCTCCACGA ATCGCTTTCC TTCTTCAGCA TGGCCACGGT CGGCATCTTC
ATTATGTTCG AGAGGCGCTA CAAGGCGTCC ATCCTCGGCT CGTTCGTCAT GCCGCTGGCG
CTTTTGATCC TGGCGATCTC GGCGACCTTC TCGGCCGTCA TCCCGCCGCT GAACCCCGCG
CTCAAGAGCA AGTGGCTCGC CATCCATACC ATCATGGCCT TCCTCGGGTA CGCGGCCTTC
GCCATCTCCT TCGGCGTCAG CGTCATGTAC CTGATCCAGT CGCACTTCCT GAAGAAGCGC
CGGCTCGGGC CGATGTTCCA GAAGCTGCCG CCGCTCGACA TGCTGGACGA CATCAGCTAC
CGCTGCCTTA CCTTCGGCTT CCCGCTGCTG ACCTTCGCCA TCATCTCCGG CGCCATCTGG
GCCGAAACCG CGTGGGGCAC CTACTGGAGC TGGGACCCCA AGGAAACCTG GTCGCTCATC
ACCTGGTTCA TCTACGCGGC GCTTCTCCAC GGCCGGCTCA CTACCGGCTG GCGCGGCAGG
AAAGCTGCCA TGCTTTCCAT TTTCGGATTT GTCATCATGC TCTTCACCTT CCTCGGCGTG
AATCTTCTCC TGTCGGGGCT GCACAGCTAC AAGTAA
 
Protein sequence
MNALLFNSTL VIYAVATVIY LAYLVKPKQS LGRAGFWLTV AGFVVHLGFT LNRFLEAGHT 
PITNLHESLS FFSMATVGIF IMFERRYKAS ILGSFVMPLA LLILAISATF SAVIPPLNPA
LKSKWLAIHT IMAFLGYAAF AISFGVSVMY LIQSHFLKKR RLGPMFQKLP PLDMLDDISY
RCLTFGFPLL TFAIISGAIW AETAWGTYWS WDPKETWSLI TWFIYAALLH GRLTTGWRGR
KAAMLSIFGF VIMLFTFLGV NLLLSGLHSY K