Gene Gbem_0387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0387 
Symbol 
ID6783213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand+ 
Start bp464384 
End bp464818 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content55% 
IMG OID642766355 
Productlarge conductance mechanosensitive channel protein 
Protein accessionYP_002137212 
Protein GI197116785 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1970] Large-conductance mechanosensitive channel 
TIGRFAM ID[TIGR00220] large conductance mechanosensitive channel protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0376217 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAAAG AATTCAAGCA GTTTGCTCTC AAGGGGAACG TGCTGGACTT GGCTGTAGCT 
GTCGTGCTCG GCGCCGCGTT CGGAAAAATT GTAAGCTCCT TCGTATCCGA CATACTCACC 
CCGCCCATCG GAAAACTCCT CGGAAACATC GACTTCTCCT CGTTATTCCT GAATCTCACC 
AGCACCCCGA TCCGCTCTGT AGCAGAGGCT AAAGCCCTGG GGGCGCCGGT CATCGCCTAT 
GGTCTCTTCC TGAACGCTGT ATTTGACTTC ATCATCATCG CCTTTGCGCT GTTCCTGCTG 
GTGCGCCAGG TGAGCAAGAT GCTTCCCCCT CCGACACCCC CGGTTGCCAC CAAGGAATGT 
CCACACTGCT GCACCATGAT ACCTGTCAAA GCGTCCCGTT GTCCCAACTG CACTTCATCC 
CAGTCTGAAG CCTAA
 
Protein sequence
MLKEFKQFAL KGNVLDLAVA VVLGAAFGKI VSSFVSDILT PPIGKLLGNI DFSSLFLNLT 
STPIRSVAEA KALGAPVIAY GLFLNAVFDF IIIAFALFLL VRQVSKMLPP PTPPVATKEC 
PHCCTMIPVK ASRCPNCTSS QSEA