| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0360 |
|---|
| Symbol | |
|---|
| ID | 6783186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 438777 |
|---|
| End bp | 439235 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642766329 |
|---|
| Product | transcriptional regulator, BadM/Rrf2 family |
|---|
| Protein accession | YP_002137187 |
|---|
| Protein GI | 197116760 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1959] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000032246 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGATTAT CGACCAAGAG CCGTTACGGC CTGCGTGCTC TTTTTGACAT CGCCTATAAC
GCCGGGAGCC AGCCGGCGCA GATCCAGGAT ATATCCCGCC GCCAGGACAT CTCGCCGCGC
TACCTGGAGC AGATCTTCCA GGGACTCAAG AAACACGGGA TTTTGAAGAG CAAGCGCGGG
CCGCAAGGGG GCTACTGCCT CGCCAAGAGC CCGGAGGAAA TCACGGTGCG CGCCGTCATC
GAGGCGACCG AAGGGGATAC CCTCATCGTC GACTGTGCCA GCCGGAAAAA AGGGGAGTGC
AACTTCGACG GCAGCTGCGT CACCCAGACC GTGTGGGAAG AGTCCAACAA CAGGTTGAAC
GAGTTCTTCG AGTCGATCAC GCTGAAGACC TTGTGCGACC GCGGCGAGAC GCTCGGCATC
AAGCGAGAGC AGGACCACCG CTTCATGTAC TTCATCTAG
|
|---|
| Protein sequence | MRLSTKSRYG LRALFDIAYN AGSQPAQIQD ISRRQDISPR YLEQIFQGLK KHGILKSKRG
PQGGYCLAKS PEEITVRAVI EATEGDTLIV DCASRKKGEC NFDGSCVTQT VWEESNNRLN
EFFESITLKT LCDRGETLGI KREQDHRFMY FI
|
|---|
| |