| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0352 |
|---|
| Symbol | |
|---|
| ID | 6783178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 433820 |
|---|
| End bp | 434689 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642766321 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002137179 |
|---|
| Protein GI | 197116752 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0177] Predicted EndoIII-related endonuclease |
|---|
| TIGRFAM ID | [TIGR02757] conserved hypothetical protein TIGR02757 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.819934 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAGCT CGCTGGAACT TAAAACCGTA CTCGATTCAC TTTACGCCGT CCGCTCGCAG
GAGCACCTCG CCAACGACCC GCTTTCGTTC TGCCACCGCT ATGCCGACCC GCGGGACCAG
GAGATCGCCG GCCTCATCGC CTCCTCGTTC GCCTACGGCA ACGTCAAGAT AATCAAGAAG
AACCTCGCCT GGATCTTCGA CCGGATGGGG GATTCCCCGC GCCGCTTCGT CGAGCGGTTA
GAGCCGGAGC AAGGCTCCCG GCTCTTCGCC GGTTTCAAGC ACCGCTTCAA CGACGCCCGC
GACCTCTGCG CGCTCCTTTT CGCCTGCCGC ACCATGCTGG AGCAGGCGGG GTCCGTGGAG
GGGTGGCTGC TCCAGTTCCA CGTCCAAGGG GAGGAGGACC TGACCGGGAC CCTCTCCGGG
TTCAGCGAGG CGGTGAAGTC CCTCGACTTC ACCCCCGTCT TCGGCGCCGC CACTCCCCCC
GCCGACTCCT ACTTCCCCTT CTTCTTTCCC TCCCCCGCCT CGGGTAGCGC CTGCAAAAGG
CTCTGCATGT ACCTTCGGTG GATGGTGCGG CCGGCCGACG GCATCGACCT GGGGATCTGG
AAGGGGATCA GGCCGGACCA GTTGGTCATC CCCGTGGACG CGCATATCCA GCGCATCTGC
AGGCTTCTGG GCTTCACCGC CCGCAAGCAG GCGGACTGGC GCATGGCGCG CGAGATCACC
GCGGCGCTGC GCGAGCTCGA CCCGGCGGAC CCGGTCAAAT ACGACTTCTC CATCTGCCAC
CTGGGGATCT CCGAGGGTTG CGACGGCAAG GACCACTTGA AGTGCGTAGC CTGCCCCATC
GCCGGGCTCT GCCCGGTTGG ATCGCCTTGA
|
|---|
| Protein sequence | MRSSLELKTV LDSLYAVRSQ EHLANDPLSF CHRYADPRDQ EIAGLIASSF AYGNVKIIKK
NLAWIFDRMG DSPRRFVERL EPEQGSRLFA GFKHRFNDAR DLCALLFACR TMLEQAGSVE
GWLLQFHVQG EEDLTGTLSG FSEAVKSLDF TPVFGAATPP ADSYFPFFFP SPASGSACKR
LCMYLRWMVR PADGIDLGIW KGIRPDQLVI PVDAHIQRIC RLLGFTARKQ ADWRMAREIT
AALRELDPAD PVKYDFSICH LGISEGCDGK DHLKCVACPI AGLCPVGSP
|
|---|
| |