| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0348 |
|---|
| Symbol | |
|---|
| ID | 6783174 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 429914 |
|---|
| End bp | 431143 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642766317 |
|---|
| Product | acetate kinase |
|---|
| Protein accession | YP_002137175 |
|---|
| Protein GI | 197116748 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0282] Acetate kinase |
|---|
| TIGRFAM ID | [TIGR00016] acetate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCATCC TCACCCTCAA CTGCCGGAGC TTTTCCGTGC AGTATCAACT TTTCGACTGG
GGGCAAAACC GCACCCTGGC CAGCGGGAAC GTGGAGCGGA TCGTCATCGG GGATACCTTC
CTCATCCACA AGGTCCCCGG CAAGGAGCCC AGGCAGCTTG ACGCCGACTG CGCCGATCAC
ACCCAGGCGC TGCAATTCGT GTTGGACACG CTGACCGACG CGAAGGACGG GGTGCTCCCT
GATGTAGCAA GCATCCGCGC CATCGGGCAC CGCGTGGTTC ATGGGGGAGA GAGGTTCACC
AGGTCGGTGC TGATAGATGA CGACGTCGTC GCGGCCATCA AGGAGACCGC GAACCTCGCC
CCGCTGCACA ACACCCCGAA CTTGGCCGGC ATCCGGGCAG CGCAGGAGCT CTTGCCCGAC
CTGCCGCAGG TCGCCATCTT CGACACCGCC TTCCACCAGA CCATGCCGGA AAAAGCCTAT
ATCTACCCAC TTCCCTACGA CTGGTACAAG CAGCACGGCA TCAGGCGCTA CGGCTTCCAC
GGGCAGTCAC ACCTCCATGC CGCCAGGAGG GGGGCCGCGC TCGCCGGGGT TCCCCTGGAG
CGCTGCAACC TGGTGACGGT GCACACCGGC AACGGCGTGT CGCTCTGCGC GCTGAAAAAC
GGGGTCTCGG TCGATACCAG CATGGGGCTC ACGCCGCTGG AAGGGGTGAT GATGGGGACC
CGCTGCGGCG ACATAGACGC GGGGATCGTC CCGTTCATGA TCAACGAGGC GGGCATCTCG
GCGACGGACA TGGATCTCTT CCTGAACCAG AAGAGCGGGC TCGCGGGGAT AGTGGGGCGC
CGGGTGAGCC GCAGGACGGT GGTGGACGAG GCGGTGGTGG GAGACGCACG TTGCCAGCTG
GCTCTCGACA TGGAGTCCTA CCGTCTGCGC AAGTACATAG GGGCCTACAT CGCCGTGATC
GGCAAGCCCG ACGCCATCGT CTTCACCTAC GGCGAGGGGT GGGAGGACTG GCCGGTCCGG
GGTATGGCGC TCAAGGGGAT GGAACAGTTC GGCATCGAGG TGGACCTGAA GCGGGACGAG
GAGGCCTTGC GGGGCGAGCG GGAGATGCTG ATCAGCGCCG ACAGCTCCAA GGTCAAGGTG
TTTGCCCTTC CCAGCGGCGA GGAGATGATG CTCAACGAAG ACGTGGCCGC CATTATGGGG
TGGCCGGTGC GCGAGGCGGG TGCTGCCTAG
|
|---|
| Protein sequence | MLILTLNCRS FSVQYQLFDW GQNRTLASGN VERIVIGDTF LIHKVPGKEP RQLDADCADH
TQALQFVLDT LTDAKDGVLP DVASIRAIGH RVVHGGERFT RSVLIDDDVV AAIKETANLA
PLHNTPNLAG IRAAQELLPD LPQVAIFDTA FHQTMPEKAY IYPLPYDWYK QHGIRRYGFH
GQSHLHAARR GAALAGVPLE RCNLVTVHTG NGVSLCALKN GVSVDTSMGL TPLEGVMMGT
RCGDIDAGIV PFMINEAGIS ATDMDLFLNQ KSGLAGIVGR RVSRRTVVDE AVVGDARCQL
ALDMESYRLR KYIGAYIAVI GKPDAIVFTY GEGWEDWPVR GMALKGMEQF GIEVDLKRDE
EALRGEREML ISADSSKVKV FALPSGEEMM LNEDVAAIMG WPVREAGAA
|
|---|
| |