Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0314 |
Symbol | |
ID | 6783140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 387500 |
End bp | 389251 |
Gene Length | 1752 bp |
Protein Length | 583 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642766283 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_002137141 |
Protein GI | 197116714 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACAG AAGAGTTGTT ACAAGACCTC AAGATGAGAG GCGAACTTGA CGAGCGCCAC CTTTTGGCGT CGATCCGATT GCTGCACCTA CTCGCCTCGG GAAAATCCTC CCAAGAGGTC ATGTCGACGT TGTTACCCTT CTTTCAGGAA CTTTCTGGAT GTGAAGCGGT CGCTGTACGG CTACGCGAAG AAGAGGATTA CCCCTATTTC CAAACGGTGG GGTTCCCATC GGAGTTCGTG AACGCTGAGA ACTATCTGTG CGCGAAAGAC TTGGCCGGCC AGATAAAAAG GGATGCCATC GGCCATCCAG TCCTGGAATG CATGTGCGGT AACATCCTGT GTGGACGGTT TGATGCCAAT AAATCGTTCT TTACCCCAAA TGGCAGTTTC TGGACAAACA GTACTAGCGA GTTGCTCGAA AGTACTGCCG AAGAGGACAG GCAGTCAGCA ACCCGCAACA GGTGCAGCGC CGATGGATAC GAATCGGTAG CCCTGGTTCC CCTGCACCAT AATGAAGACA TCATTGGACT AATACAGTTT AATGACCGAC GCAAAGACCG ATTCTCCAAA GGGTTTATTG CACTTGTAGA GTTGTTGGCA GACAGTGTGA CCGTTGCGGT ACTTCGGCGG TGGGAGGAAG AGAGCCTCAG GAAGCGTGAA GAGTATTACC GCGCTATGGT GACAGCGTTC GACGGCCTCA TATACATTTG CTCGGCCAAT TACCGGATCG AGTTTCTCAA TGAAGCTATG AAGCGGCGTA TTGGCCACGA CGCCATTGGC GAATTGTGTT ATGAAGCTCT GCATGGGCTT GATGCTATCT GCCCGTGGTG TAAAAATGAT CGTATTTTCG CAGGTGAAAG CCATCGTTGG GTGGTCCAGA GCCCAAAAGA TAACCGTTGG TACGAAGTGT CTAATACCCC TATAAGGAAA AACAATAAGA TCGTTTCCAA ACAGGCCATG ATTATGGACG TAACAGACCG GCAACAGTTG CACGAGGAGC TTTTGCAGAA ACAACAAGAT TTGATATTGG CAAATGATCT ATTAGAAAGC CGGGTTGCCG AGAGAACTTC CAATTTGGAG GCAGCAATGA GGGAACAAGA GTCATTCAGT TACTCGGTTT CCCATGACCT GCGCGCCCCC CTGCGCCACA TTAACAGCTT CAGCGCCATT GTCATGGAGG AATTCTCGAA TGAACTGCCT GCCCCTGTGA AAGACTACCT GGTGCGGATT CGCTCAGCGT CAAACAGGAT GGGAGGATTG ATCGACCACC TGCTTGAACT GTCCCGGGTA GGCAGGGCGG CGCTGAAACT GGAACCGGTG GATTTGAGCA TGATGGCCGC GTCCATTTTG ACCGCTCTCC AGGAGACGGA GTTGAAGCGG ACCGTGAAAA TCTTTGTGGA AGAGGATGTG CGGGTACTGG GGGACCGGAC GCTGTTGCAA CAGTTGCTGG AGAATCTGCT TGGAAATGCC TGGAAGTACA CCTCCAAAAC CGTAACAGCG CATATCGAAT TCGGCAGTTC AAAGCGAGGC GACAGCACGA TCTTTTATGT CAAAGATAAC GGCGCAGGGT TCGACATGCA GTACAAGGAC AACCTGTTCA TTGCCTTCCA GCGTTTGCAT ACTGCGGAGT TCGAGGGCGA AGGGATCGGG CTTACGACTG CACAGCGTAT AATCCATCGC CACAGTGGGG ACATCTGGGC TGAAGGAGAA GTAGGAAAGG GGGCGACTTT CTACTTCACT TTGCCGAATT AG
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Protein sequence | MTTEELLQDL KMRGELDERH LLASIRLLHL LASGKSSQEV MSTLLPFFQE LSGCEAVAVR LREEEDYPYF QTVGFPSEFV NAENYLCAKD LAGQIKRDAI GHPVLECMCG NILCGRFDAN KSFFTPNGSF WTNSTSELLE STAEEDRQSA TRNRCSADGY ESVALVPLHH NEDIIGLIQF NDRRKDRFSK GFIALVELLA DSVTVAVLRR WEEESLRKRE EYYRAMVTAF DGLIYICSAN YRIEFLNEAM KRRIGHDAIG ELCYEALHGL DAICPWCKND RIFAGESHRW VVQSPKDNRW YEVSNTPIRK NNKIVSKQAM IMDVTDRQQL HEELLQKQQD LILANDLLES RVAERTSNLE AAMREQESFS YSVSHDLRAP LRHINSFSAI VMEEFSNELP APVKDYLVRI RSASNRMGGL IDHLLELSRV GRAALKLEPV DLSMMAASIL TALQETELKR TVKIFVEEDV RVLGDRTLLQ QLLENLLGNA WKYTSKTVTA HIEFGSSKRG DSTIFYVKDN GAGFDMQYKD NLFIAFQRLH TAEFEGEGIG LTTAQRIIHR HSGDIWAEGE VGKGATFYFT LPN
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