Gene Gbem_0303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0303 
Symbol 
ID6783129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp375669 
End bp376673 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content63% 
IMG OID642766272 
Productamidohydrolase 2 
Protein accessionYP_002137130 
Protein GI197116703 
COG category[R] General function prediction only 
COG ID[COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGAACG ACACGAGAAA GAACATCATC GACATCCACT GCCACACGGC GGGGATCGGG 
GCGGGAGAGA GCGGCTGCTT CGTGTCGCCT GCCTTGATGG GAAGTTGGAA GTACTGGGTC
TACCTCCGCG CCTTTGGCGT TACGGAGCAG GAACTGAAGC GGGAGGGGGA CGGCCTGGTG
ATGCGCCGGA CTTCGGAGCG CCTGGCGCAA TCGGAGCGGG TGGCATCCGC GGTCATCCTC
GCCATGGACG GCGTGGTAGA CGCAAACGGG AACCTCGACA GGTCGCGCAC GGAAATGTTC
ATCCCCAACG AGTTCGTGGC GAAGGAAACG GCCAAGTACC CGAACCTCCT CTTCGGCGCC
AGCATCAACC CGTTCCGCCC TGACGCCATC GAACGGCTGG AGCGGGCCGC GGAATCTGGT
GCGGTGCTGC TGAAGTGGCT TCCCGCCATC CAGCACATCG ACCCTGCGGA CGAAAGGCTG
ATCCCGTTCT ACCTGAAGCT GAAACAACTG GGACTGCCGC TCCTCACCCA CACGGGGAAG
GAAAGCTCTT TCACCAGCGC GAAGGAAGAA CTGGGGGACC CGGAGCGCCT GAGGCTGCCG
CTTTTCTTAG GCGTCACGGT GATCGCCGCA CATGCCGCGA GCAGCGGGAA AAGCCAGGGG
GAGGATAACC ATGACCGCTT CCTGCGCTTG TGCCGGGAAT TCCCCAACCT CTATGCGGAC
ATCTCGGCGC TTACCCAGAT AAACCGCCTG GGTCACCTGC AACGTCTCCT CAAGCAGACC
GAGCTGCACG GCCGCCTCTT GTACGGAACG GACATGCCGC TTTTGAGGAC GCCGCTGGTC
ACCCCTTTCG CCTACTCCCA CGTGCTGCCG CTTCGGCGCA TGGTGGAGAT TGCCCGCATT
GCCAACGTGT GGGACCGGGA CGTGGCGCTG AAAGAGGCGC TGGGGGTGCC GGAGCTGGTC
TTCAACAACG TGCAGTGGAT GAAGGACACG CCCCCCCTCC CTTGA
 
Protein sequence
MPNDTRKNII DIHCHTAGIG AGESGCFVSP ALMGSWKYWV YLRAFGVTEQ ELKREGDGLV 
MRRTSERLAQ SERVASAVIL AMDGVVDANG NLDRSRTEMF IPNEFVAKET AKYPNLLFGA
SINPFRPDAI ERLERAAESG AVLLKWLPAI QHIDPADERL IPFYLKLKQL GLPLLTHTGK
ESSFTSAKEE LGDPERLRLP LFLGVTVIAA HAASSGKSQG EDNHDRFLRL CREFPNLYAD
ISALTQINRL GHLQRLLKQT ELHGRLLYGT DMPLLRTPLV TPFAYSHVLP LRRMVEIARI
ANVWDRDVAL KEALGVPELV FNNVQWMKDT PPLP