| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0302 |
|---|
| Symbol | |
|---|
| ID | 6783128 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 372130 |
|---|
| End bp | 375504 |
|---|
| Gene Length | 3375 bp |
|---|
| Protein Length | 1124 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642766271 |
|---|
| Product | 2-acyl-glycerophospho-ethanolamine acyltransferase |
|---|
| Protein accession | YP_002137129 |
|---|
| Protein GI | 197116702 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase
[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
[COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATCGA ACTCACGCTC CAACCCGCTT GCCTGGCTCA ACGCGACCCA GTTCCTCGGG
GCCTTGAACG ACAACATACT GAAGCTTTTG ATCATCTTCT TCCTGATCGG CACACATGGC
GCGGCCGAAG CCGGTGCGGT CACGGCAGGG GTGGGCGCTG CTTTCGTGCT CCCCTTCCTG
ATCCTGTCGG CACCGGCCGG TAGCCTCGCC GACAAACTGG CGAAGTCCCG GCTCATCTTC
GGGGTGAAAC TGTTCGAGGC GGCGGCGACG CTTCTGGCAG TCATCGCCTT CGCCCTGCGC
CTTGAGCCTC TCCTCTACCT GGTCGTCTTC CTGATGGGTT GCCACAGCGC GCTCTTCGCG
CCGGCCAAGT ACGGGATCAT TCCGGAACTG GTCCCCAAGG AAGGGCTCTC CCGCGCCAAC
GGGCTGATCG AATCTTTCAC CTTCCTGGCC ATCATCGTCG GCACAGCGCT AGCCTCGGCA
CTCACCCAGG CGGCAGGTGG GCGCTTTTGG CTGGCGGCAT GCGCCTGCCT CGCGGTGGCG
CTCACCGGAC TTGGCTCCGC GCGGTTGATG GGAAACACGG TCCACTGCGA CGCCTCCCGG
CCGGTTGCCC TCCTCCCCAC CCGCATCCTT AAGACGGTGA ACGAAATGCG CCGCGACCGC
CACCTCATGC TGGCGGTCAT CGGGCTCGCC TGGTTCATGT TCATCGGGGC CTTCGCCCAG
CTGAACCTGA TCGGCTACGG GATGGAAGAA CTCGGGCTCA CCGAGGCACA GAGCGGCTAC
CTCTTCCTGG CGGCGGCTTT CGGCATCGGC ATCGGGTCGC TTCTTGCCGC GAAGCTTTCG
GGAAGGGACG TCGAGTTCGG CATCGTGCCG CTGGGGGCCA CCGGCCTCAC CCTGGCGCCG
GTGCTGCTGC ACGCCGTCCC CGGCAACCTC GCCGCGAGCC TGGTCATCAT CGTCGGCTTC
GGCGTCTCGG CGGGGGTATT CAGCCTGCCG CTGCAGACCT TCATCCAGCT TCGGGCGGAC
GATTCCAATC AGGGGGAGGT GCTGGCGGCC TCCAGCTTCA TCAACTGGGT GGGGATACTG
GCAGCCTCCG GGCTCACCTG GCTCTTCAGC GGCCCGCTGG GTATGAGCGC AGCGCAAGGG
TTCAGCCTCG TCGGCGCCAT GACGCTGCTC CTCACCGCGC TTTCCTTCCG CGCCCTCCCG
GACTTCCTGC TGCGCTTCAT AGCACTTGTT ACCATGCGCA TCTTTTACCG GATCAGGATC
ATCGGCAGAG AGAACCTCCC GGTGGAAGGG CCGGCGCTCC TCATCCCCAA CCACGTGACC
TGGGCGGACG CGCTCCTCCT GACGGCCACC AACCAGCGCC GCATCCGTTT CGTCATGGAG
CGGAGCATCT ACAACACGCC GGTCTTGAAC GCCCTGTTCC GACTGATGGG GGTGATCCCG
GTCTCCTCCA CGGACGGCAA GAGGGAGATG CTGCAATTCA TCAAAAGCGC CCGCGCGGCA
CTCGACGAAG GGTACATGGT CTGCATCTTC GCCGAGGGCG CGCTCACCCG CAACGGGATG
CTAGGCGAGT TCCGCGGCGG CTTCGAGCGC ATCGTGAAAG ACAGCGGCCA CCCCATCGTC
CCCGTCTACA TCGGCGGCGC CTGGGGGAGC ATCCTCTCCT ACGCGCACGG CCGGCTTCTC
TCCCGACTGC CGGCGCTTGC CCCCTACCCG GTCACCATCC TCTTCGGGAT CCCGATGCCG
GCCAAAAGCC GCGCCATCGA GGTACGCCAA AAGGTGGCGG AACTCTCCTG CGACTATTTC
GAATCGAAGA AAGAGCAGCG CCGCCCGTTG CCGGAGTATT TCGTACGCAC GGCGCGGCAA
CAGTGGAACC GCAACGCCAT CGCGGACAGC TCCGGCAAGA ACCTTAGCTA TGGTCGGACG
CTGGCGGGGG CCGTTGCGCT GGCGGGTAAA GTGGAGCGGG AGCTCGGCGC CTCGGTGCAT
GTGGGGATAC TGCTCCCTCC TTCGGCGGGT GGGGCACTGG CAAACCTGGC GGTCTCGTTG
CTGGGGAGGA TCCCGGTGAA CCTCAACTAC ACCGCGACGG AATCTTCCTT TCGCTCCGCG
ATAGAGCAGT GCGGCATCAG CACGGTTATA ACCTCGCGGG TGTTCCTGGA GAAGCTCCCC
GCCCTGCCAC GACTCTCAGG GATGATTTAC CTGGAGGACC TTGCCCCCGC CATCTCCGGT
TGGGACAAGC TGACCGCCGT CCTTAAGGCG CGCCTCTTCC CTGTCCGCCT CATCTGCCGC
AGCGGCGCAT TCCACCCGGA CCGGACCGCG ACCGTCATCT TCTCGTCCGG CAGCACCGGC
GAACCGAAGG GGGTGATGCT CAGCCACCAC AACATCATGT CCAACATCGA GGCGCTGCGC
ATGGTGTTCC GTGTCGACCT GAACGACAAC GTCTGCTCCG CCCTACCCTT CTTCCATTCG
TTAGGATTCA CCGGGACGCT CTGGTTCCCG CTGGTCTCGG GCTTTTCCGC CGCCTACCAC
CCGAACCCCA TGGAAGGGGA GAAGATCGCC GCGGTCGCGC GAGAGCACAA ATCCACGCTG
CTTCTCGCCA CGCCCACCTT CCTGCTCGCC TATCTGCGCC GGGCAAAAGT GGAGGATTTC
GCCGCCCTGA GGCTGGTGAT CACCGGGGCC GAGAAGCTGA AGGTTAAGGT CGCCGATGCC
TTCGAGGAGA AGTTCGGCGT GCGCCCGATG GAGGGATACG GGGCAACCGA GCTTTCGCCG
GTTATCACGC TGAGCCTGCC GGACGTGGAG ATCGACGGGG TCAGGCAGCA TGGCTCCAAG
GAGGGAAGCG TGGGGCATCC GATTCCGGGC GTCGCCATCA AGGTGGTGGA TCCGGAGAGC
GGGGCCGTAT TGGAGCCGGG AGCGGCGGGG ATGATCCTGG TCAAGGGACC GAACGTGATG
TCGGGGTATC TCGGGCGCGC CGACAAGAGC GCGGAGGTGC TGCGGGACGG GTGGTACCTG
ACCGGCGACA TCGGCGTGAT GGACGAGGAC GGTTTCATCA GGATCACCGA CCGTATGTCC
CGGTTCAGCA AGATCGGCGG AGAGATGGTG CCGCACGGGG CAATCGAGGA CGAACTGCAC
ACGTGCCTGG GGCAAACCGG CGTGCTGGCG GTCACCGCCG TCCCGGACGA TAAGAAGGGG
GAAAAGCTGG TGGTGGTTTA TGCCAGGGGG GCCACCGACG CCGTTACGAT GCAGCGGCAT
CTGGCGGAGA GCGCGCTGCC GAACCTGTGG AAGCCGGCGC GGGATTGTTA CCTGGAAGTG
GAAAGCCTCC CGATGCTGGG GACGGGGAAG CTGGATCTCA AAGGGCTGAA GGAGTTGGCG
CTGGCTGGGC TTTAA
|
|---|
| Protein sequence | MTSNSRSNPL AWLNATQFLG ALNDNILKLL IIFFLIGTHG AAEAGAVTAG VGAAFVLPFL
ILSAPAGSLA DKLAKSRLIF GVKLFEAAAT LLAVIAFALR LEPLLYLVVF LMGCHSALFA
PAKYGIIPEL VPKEGLSRAN GLIESFTFLA IIVGTALASA LTQAAGGRFW LAACACLAVA
LTGLGSARLM GNTVHCDASR PVALLPTRIL KTVNEMRRDR HLMLAVIGLA WFMFIGAFAQ
LNLIGYGMEE LGLTEAQSGY LFLAAAFGIG IGSLLAAKLS GRDVEFGIVP LGATGLTLAP
VLLHAVPGNL AASLVIIVGF GVSAGVFSLP LQTFIQLRAD DSNQGEVLAA SSFINWVGIL
AASGLTWLFS GPLGMSAAQG FSLVGAMTLL LTALSFRALP DFLLRFIALV TMRIFYRIRI
IGRENLPVEG PALLIPNHVT WADALLLTAT NQRRIRFVME RSIYNTPVLN ALFRLMGVIP
VSSTDGKREM LQFIKSARAA LDEGYMVCIF AEGALTRNGM LGEFRGGFER IVKDSGHPIV
PVYIGGAWGS ILSYAHGRLL SRLPALAPYP VTILFGIPMP AKSRAIEVRQ KVAELSCDYF
ESKKEQRRPL PEYFVRTARQ QWNRNAIADS SGKNLSYGRT LAGAVALAGK VERELGASVH
VGILLPPSAG GALANLAVSL LGRIPVNLNY TATESSFRSA IEQCGISTVI TSRVFLEKLP
ALPRLSGMIY LEDLAPAISG WDKLTAVLKA RLFPVRLICR SGAFHPDRTA TVIFSSGSTG
EPKGVMLSHH NIMSNIEALR MVFRVDLNDN VCSALPFFHS LGFTGTLWFP LVSGFSAAYH
PNPMEGEKIA AVAREHKSTL LLATPTFLLA YLRRAKVEDF AALRLVITGA EKLKVKVADA
FEEKFGVRPM EGYGATELSP VITLSLPDVE IDGVRQHGSK EGSVGHPIPG VAIKVVDPES
GAVLEPGAAG MILVKGPNVM SGYLGRADKS AEVLRDGWYL TGDIGVMDED GFIRITDRMS
RFSKIGGEMV PHGAIEDELH TCLGQTGVLA VTAVPDDKKG EKLVVVYARG ATDAVTMQRH
LAESALPNLW KPARDCYLEV ESLPMLGTGK LDLKGLKELA LAGL
|
|---|
| |