Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0300 |
Symbol | |
ID | 6783126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 369942 |
End bp | 371159 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642766269 |
Product | putative sensor with HAMP domain |
Protein accession | YP_002137127 |
Protein GI | 197116700 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.168861 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCAGGA CCACGACGCG AAAAATGTTC CTCTCGCTGC ATGTGTTCTT GTTTCTAATC GTCTCCGCGG CCATCATCCT CACCGTCAAC AATCAGCAGC GTGCCCAGGC GCTGGTGGAG GCCCAGGAAA AGGCGAGGCT GATCCTGGAC CGTAACCTCG CCATCCACAG CTATTTTTCC AATCAGCTAA AACCGCAGAT TTTTCACCTG ACCGACAAAT ATCGCCCCGA GCAATATTTC GACCCGGTGT GGATGTCCTC CACCTACGCG GTGCGGGAGA TCGATCTTTA CAACAAGGCC TTCTCCAAGA GCGACATCTA TTACAAGGAG TGTGCGATCA ACGCCCGCAG CCCGCGCAAC GAAGCGGATC CGGTAGAACG GGCCTTCCTG GAGGAGATCA GGAAAGACGC TGGCCTTTCC GTGAAGTCCT TCGTCCGGCA GATCGACGGG AAACCCTTCT TCGTGGTTAT GCGTCGCGGC GAGAGCATGG AAAAGAGCTG CCTGCGCTGC CACAGCACCC CGGCCGCGGC GCCTGCCGAC ATGGTGGCGA GATACGGCCC CGAGCGCAGC TTCAGCCGTC AGGACGGCGA ACTGGTCTCC GCCATATCGA TACGCATCCC GCTGCAGGAG GCGTACGCCA ACGCCAACAA GCTCTCCTTC GAACTCTGCT TGCTGCTCTT GGCCATCCTC GGGGTGTCGT CTGCGGCGCA GTTCCTGGCC ATGAACCGCA TGCTGCTGAA CCCGCTCACT GACCTGCGAG ACCGGACCGA CGCCATACTG CGCGACGAAA GCAAACTGGG GCAGGATATC CCCCAGTTGT CGAGGGCGGA GGAACTGAAA GAGCTCACGG CAACCTTCAA CGACCTCTCC CGCCATCTGC GCAGGGAGAA GGACGGGCTG GTGGAGCAGG TGCAGGAAAG GACTGCGGAG CTGGAGTCGG CCAACAAGGC GCTGGAGGAA GACGTACTAG TGCGCGAGCA GATACAGCTC GAACTGGCGG CCAAGGTCGC GCAGCTTGAA CAGGCCCTGG CCAAGGTGCG GACCCTGGAA GGGATTCTCC CCATCTGCTC GTACTGCAAG AAGATACGCA CCGACGAAGA GAGCTGGCAG CAGTTGGAGC AGTACATAAT CGAGCATTCC GATGCGCACT TCAGCCACGG CATCTGCCCG TCCTGCTTCA AGGAGCTCAA GGAGGGGTTC AAGAAATTGG AACGGTAA
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Protein sequence | MLRTTTRKMF LSLHVFLFLI VSAAIILTVN NQQRAQALVE AQEKARLILD RNLAIHSYFS NQLKPQIFHL TDKYRPEQYF DPVWMSSTYA VREIDLYNKA FSKSDIYYKE CAINARSPRN EADPVERAFL EEIRKDAGLS VKSFVRQIDG KPFFVVMRRG ESMEKSCLRC HSTPAAAPAD MVARYGPERS FSRQDGELVS AISIRIPLQE AYANANKLSF ELCLLLLAIL GVSSAAQFLA MNRMLLNPLT DLRDRTDAIL RDESKLGQDI PQLSRAEELK ELTATFNDLS RHLRREKDGL VEQVQERTAE LESANKALEE DVLVREQIQL ELAAKVAQLE QALAKVRTLE GILPICSYCK KIRTDEESWQ QLEQYIIEHS DAHFSHGICP SCFKELKEGF KKLER
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