Gene Gbem_0300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0300 
Symbol 
ID6783126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp369942 
End bp371159 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content59% 
IMG OID642766269 
Productputative sensor with HAMP domain 
Protein accessionYP_002137127 
Protein GI197116700 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.168861 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAGGA CCACGACGCG AAAAATGTTC CTCTCGCTGC ATGTGTTCTT GTTTCTAATC 
GTCTCCGCGG CCATCATCCT CACCGTCAAC AATCAGCAGC GTGCCCAGGC GCTGGTGGAG
GCCCAGGAAA AGGCGAGGCT GATCCTGGAC CGTAACCTCG CCATCCACAG CTATTTTTCC
AATCAGCTAA AACCGCAGAT TTTTCACCTG ACCGACAAAT ATCGCCCCGA GCAATATTTC
GACCCGGTGT GGATGTCCTC CACCTACGCG GTGCGGGAGA TCGATCTTTA CAACAAGGCC
TTCTCCAAGA GCGACATCTA TTACAAGGAG TGTGCGATCA ACGCCCGCAG CCCGCGCAAC
GAAGCGGATC CGGTAGAACG GGCCTTCCTG GAGGAGATCA GGAAAGACGC TGGCCTTTCC
GTGAAGTCCT TCGTCCGGCA GATCGACGGG AAACCCTTCT TCGTGGTTAT GCGTCGCGGC
GAGAGCATGG AAAAGAGCTG CCTGCGCTGC CACAGCACCC CGGCCGCGGC GCCTGCCGAC
ATGGTGGCGA GATACGGCCC CGAGCGCAGC TTCAGCCGTC AGGACGGCGA ACTGGTCTCC
GCCATATCGA TACGCATCCC GCTGCAGGAG GCGTACGCCA ACGCCAACAA GCTCTCCTTC
GAACTCTGCT TGCTGCTCTT GGCCATCCTC GGGGTGTCGT CTGCGGCGCA GTTCCTGGCC
ATGAACCGCA TGCTGCTGAA CCCGCTCACT GACCTGCGAG ACCGGACCGA CGCCATACTG
CGCGACGAAA GCAAACTGGG GCAGGATATC CCCCAGTTGT CGAGGGCGGA GGAACTGAAA
GAGCTCACGG CAACCTTCAA CGACCTCTCC CGCCATCTGC GCAGGGAGAA GGACGGGCTG
GTGGAGCAGG TGCAGGAAAG GACTGCGGAG CTGGAGTCGG CCAACAAGGC GCTGGAGGAA
GACGTACTAG TGCGCGAGCA GATACAGCTC GAACTGGCGG CCAAGGTCGC GCAGCTTGAA
CAGGCCCTGG CCAAGGTGCG GACCCTGGAA GGGATTCTCC CCATCTGCTC GTACTGCAAG
AAGATACGCA CCGACGAAGA GAGCTGGCAG CAGTTGGAGC AGTACATAAT CGAGCATTCC
GATGCGCACT TCAGCCACGG CATCTGCCCG TCCTGCTTCA AGGAGCTCAA GGAGGGGTTC
AAGAAATTGG AACGGTAA
 
Protein sequence
MLRTTTRKMF LSLHVFLFLI VSAAIILTVN NQQRAQALVE AQEKARLILD RNLAIHSYFS 
NQLKPQIFHL TDKYRPEQYF DPVWMSSTYA VREIDLYNKA FSKSDIYYKE CAINARSPRN
EADPVERAFL EEIRKDAGLS VKSFVRQIDG KPFFVVMRRG ESMEKSCLRC HSTPAAAPAD
MVARYGPERS FSRQDGELVS AISIRIPLQE AYANANKLSF ELCLLLLAIL GVSSAAQFLA
MNRMLLNPLT DLRDRTDAIL RDESKLGQDI PQLSRAEELK ELTATFNDLS RHLRREKDGL
VEQVQERTAE LESANKALEE DVLVREQIQL ELAAKVAQLE QALAKVRTLE GILPICSYCK
KIRTDEESWQ QLEQYIIEHS DAHFSHGICP SCFKELKEGF KKLER