| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0295 |
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| Symbol | |
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| ID | 6783121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 359695 |
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| End bp | 361998 |
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| Gene Length | 2304 bp |
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| Protein Length | 767 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642766264 |
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| Product | putative phytochrome sensor protein |
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| Protein accession | YP_002137122 |
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| Protein GI | 197116695 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2203] FOG: GAF domain
[COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.42905 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGGTA CAGATCAGCT CAAAGAGCAA CTCGAACACC GCAAAAGGTT CATGGAGAAG
ATCAATGAGA TCCACTCCTC CGGCAACCTG AACACCATAC TGATACAGCT GAAGGACAGC
ATCGCCGATC TGTTCGAGGC GGAGCGGCTG ACTATTTACG TGATCGACCA GAAGCAGAAG
ATGCTCATGT CGAAAGTGAA ATCGGGGGAG GAGATCCAGC AGATCACCCT CCCCATCGGC
AACAACAGCC TCGCCGGCTT CTGCGCGCTC TCCGGAACGC TCCTGAACAT CAGGGACGCC
TACGACTCCC ATGAGCTGAA GATGATCAGC TCGGGATTGA GCTTCGACGT CACCTGGGAC
AAGAAGAGCG GCTTTCGCAC CAAGCAGGTG CTCTGCGTCC CGATGAAGTT CAACAACCAG
ATGATCGGCG TGATGCAACT CATCAACAAA AAAGGGGGCG ACACCTTCGA CGATACGGAC
CTAAGCTACG CCACCGAACT TGCCACCTCC CTTTCCATAG CGATCCACAA TATCTTCCGG
CTGGCCGCCT CGGCCAAGCT GATCCGGAAC AAGTCGCGCT ACAACTACCT TTTGGACAAG
AACCTCTTGG AGGAGGCAGA CATCCAGAAG GCGACGGCGC ACCCGGACGT CGCCGCCATT
GGGCTGGACC ACGTGCTGAT GCGGGACTAC AACATCCCGC GCGAGGAGAT GATCAAGTGC
CTGAGCCTCA ACTTCGGCAC CGAGTTCGTC TCCTTCGACC CTGACCTGCC GCGGCTGGAC
GACGTCTTGA AAAAGACCAA GCCCGACCGC CTCAGGAAGG AGCGCTGGGT CCCGGTCAAG
ATCGATCACA GCGTGCTGCA GGCGGCGATG GAGGACCCGA CCGACTTGGC CAAGCAGGAC
CTGATCAAGT TCGTCTTCCA GGAGTACAAG AGGATCAGCT TCGTCGGGGC CTTCAGGGAG
GACATTGGGA AGTTCATCGA CCACTACTAC CATCTCGCTG CGGAGAGCTA CGAGGGGCCG
ACCGCCAGCA TCTCCGACCT GTTGAGCAAG CTGGACAACG ATGAGGACCC GACCATCGAG
CAGGAGGTGC AGAAGGTCTC GGAGCAGGAC AGCGTCATCG TCCAGCTGGT GAACAAGATC
ATCTGCGAAG CCCACGAAAA AAACGCTTCC GACATCCACA TCGAGCCTGC GCCGGGGCGC
GAGGACGTGA CGGTGCGGCT GAGGGTAGAC GGCAGGTGCG CGGTGTACCA GCGCATCCCC
TACAAGTACA AGCACGCCCT GACCTCCAGG ATCAAGATCA TGGCGGGGCT CGACATCGCG
GAGCGCAGAA AGCCGCAGGA CGGCAAGATC GACTTCAAGA AGTTCGGCCC CAAGGATATC
GAGCTCAGGG TGGCGACCCT ACCCAGCGCC GGGCAGCTGG AGGACGTGGT GCTCAGGGTC
CTCGCCTCGG GCGAGCCTAT CCCGTTCGAC AACCTGGGGC TCACCGAGCG CAACCGGCAG
GTGTTCACCG ACTGCATCAA GAAGCCGTAC GGGCTGATCC TGGTGGTGGG CCCGACCGGC
AGCGGCAAGA CCACGACGCT GCACTCCGCG GTCTCGGTGA TCAACACGCC GCAGACCAAG
ATCTGGACCG CCGAGGACCC CATCGAGATC ACCCAGAAGG GGCTCAGGCA GGTCCAGGTG
AACGCCAAGA TCGGCTTCAC CTTCGCCACC GCCCTGCGCG CCTTTCTGCG CGCCGACCCG
GACGTGATCA TGGTGGGGGA GATGCGCGAC GAGGAGACGG CCTCGATAGG GGTGGAATCC
TCCCTGACCG GCCACCTGGT CTTCTCGACC CTCCATACCA ACTCGGCGCC GGAGACGGTG
ACGAGGCTCC TCGACATGGG GCTCGACCCG TTCAGCTTCT CCGACGGGCT TCTTTGCATA
CTGGCGCAGC GGCTGGCCCG CAGGCTCTGC AGCGCCTGCA AGGAAAGCTA CCGCCCGACG
GAAGAGGAGC TAAAAGAGAT CATTACCGAG TACGGCGAGG CGGAGTTCGG GGCGCTGGGA
ATGGATCCGT CCGGCATCAC ACTTTCCAAG GCCAAAGGAT GCGCCAAGTG CAACGGCTCC
GGGTACAAGG GGAGGCTCGG CCTCCACGAG ATCCTCGATT GCGGGGACCA GATGAAGGCG
CTGATCAAGA CCAAGGCCGA GGTGGCGGAG TTGAGGAAGC AGGCGATCGC CGACGGCATG
ACCACGCTCA AACAGGACGG CATATTGAAG TGCTTCCAGG GGCTCACCGA CATCCACGAG
GTGCGGCGCG TCTGCATCAA ATAA
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| Protein sequence | MPGTDQLKEQ LEHRKRFMEK INEIHSSGNL NTILIQLKDS IADLFEAERL TIYVIDQKQK
MLMSKVKSGE EIQQITLPIG NNSLAGFCAL SGTLLNIRDA YDSHELKMIS SGLSFDVTWD
KKSGFRTKQV LCVPMKFNNQ MIGVMQLINK KGGDTFDDTD LSYATELATS LSIAIHNIFR
LAASAKLIRN KSRYNYLLDK NLLEEADIQK ATAHPDVAAI GLDHVLMRDY NIPREEMIKC
LSLNFGTEFV SFDPDLPRLD DVLKKTKPDR LRKERWVPVK IDHSVLQAAM EDPTDLAKQD
LIKFVFQEYK RISFVGAFRE DIGKFIDHYY HLAAESYEGP TASISDLLSK LDNDEDPTIE
QEVQKVSEQD SVIVQLVNKI ICEAHEKNAS DIHIEPAPGR EDVTVRLRVD GRCAVYQRIP
YKYKHALTSR IKIMAGLDIA ERRKPQDGKI DFKKFGPKDI ELRVATLPSA GQLEDVVLRV
LASGEPIPFD NLGLTERNRQ VFTDCIKKPY GLILVVGPTG SGKTTTLHSA VSVINTPQTK
IWTAEDPIEI TQKGLRQVQV NAKIGFTFAT ALRAFLRADP DVIMVGEMRD EETASIGVES
SLTGHLVFST LHTNSAPETV TRLLDMGLDP FSFSDGLLCI LAQRLARRLC SACKESYRPT
EEELKEIITE YGEAEFGALG MDPSGITLSK AKGCAKCNGS GYKGRLGLHE ILDCGDQMKA
LIKTKAEVAE LRKQAIADGM TTLKQDGILK CFQGLTDIHE VRRVCIK
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