| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0289 |
|---|
| Symbol | |
|---|
| ID | 6783115 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 349808 |
|---|
| End bp | 352738 |
|---|
| Gene Length | 2931 bp |
|---|
| Protein Length | 976 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642766258 |
|---|
| Product | FAD linked oxidase domain protein |
|---|
| Protein accession | YP_002137116 |
|---|
| Protein GI | 197116689 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0247] Fe-S oxidoreductase
[COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCAAC CTGAGGAGAA CGAGATATTC GTCGCGACCC AACTGAATCC GGGAGCGCTG
GAGGCCGATC TCAGGTACGC GCTGGACGCC GAGGTCCGCT TCGACGCGGG AAGCCGCGCC
CTCTACGCGA CCGACGCCTC CAACTACCGC CAGATCCCCA TCGGGGTGGT GCTTCCCAGA
ACCACCGAGG CGGTGATCAA GACCCTGGAG ATCTGCCATC GCCACGGCGC CCCCGTGGTT
TCCCGCGGCG GCGGCACGGG GCTCTGTGGC CAGACCTGCA ACGTGGCCGT CGTCATCGAC
CACTCGAAAT ACCTGAACCG GATACTGGAA CTCGACCCAG AGAAGGGGTT CGCCTGGGTG
GAACCCGGGG TGATCCTGGA CCAGCTCAGG GAGCAGGCGG AGAATTACCA TCTCACCTTC
GGGCCCGACC CCGCCACGCA CACCCACAAC ACCCTGGGTG GCATGATCGG CAACAATTCC
TGCGGCGTCC ATTCGGTCAT GGCGGGGCGC ACGGTAGACA ACATCCTGGA ACTGGACGTA
ATCACCTACG ACGGGGTCCG AATAACGGTG GGAGAGACGA CGGACCTGGA ACTCGAGGAG
ATCATCGCCC AGGGGGGACG ACGCGGGGAG ATCTACGCCG GTCTCAAATC GATACGGGAC
CGGCAGGCTA AGAGGATACG GGAGAGGTAT CCGAAGATCC CGCGCCGGGT TTCGGGCTAC
AACCTGGACG AGCTGCTCCC GGAGAACGGC TTCAACGTGG CGCACGCCCT GGTCGGGACC
GAAGGGACCT GCGTCACCAT CTTGGCGGCG AAGGTGCGCC TGGTGCACAG CCCCCCCGCC
CGCTCCATCC TCTTGCTGGG CTACCCCGAC GTCTACTCAG CAGGCGACCA CGTGCCTGAG
ATCCTGAAGT TCGAGCCGGT GGGCCTGGAA GGGCTGGACG ATCTCCTGGT GAAATTCATG
CAGAAAAAGA AGCTGCACCC GGAGGACATC GAGCTGCTGC CGCCGGGAAA AGGGTGGCTC
CTGGTGGAAT TCGGAGGCGA GACGGAGGAG GAGTCGGACC AGAAGGCGAA AGACGCCATG
GAGGCGCTGA AGAAGCTGAA AGACCCTCCC AGCATGAAGC TGTTTATCGA CGAGAAGGAA
GAGAAGAGGA TCTGGGAAGT CAGGGAGTCG GGTCTTGGCG CGACTGCGAA CGTCCCCGGA
TTCCCCCTTA GCTGGCCCGG GTGGGAGGAC GCGGCGGTGG CCCCGGACAA GATCGGCGGC
TACTTGCGCG AGTTCCGCAA GCTTCTCGAC CGGCACGGGC TGAACGCTTC CCTCTACGGC
CACTTCGGCG ACGGCTGCAT CCACTGCCGC ATCTCCTTCG ACCTCTTCTC CGCGGAAGGT
GTGGCCAACT TCACCTCTTT CCTCGACCAT GCCTCCGACC TCGTGGTCAG CTACGGCGGC
TCCTTTTCCG CCGAGCATGG GGACGGTCAA TCCAAGGCGC TCTATCTGCG CAAGATGTAC
GGCGACGAAT TGATCGAGGC CTTCCGGCAG TTCAAGGGTC TGTGGGATCC GCAGTGGAAG
ATGAACCCGG GAAAGGTGGT GGACCCGTAC CACCCGGACC AGAACCTGAG GCTCGGGGTG
ACTTACGACC CCTGGCAGCC GGAGACCCGC TTCCGCTTTC CCACAGACGA GACCAGTTTC
GCCAGGGCGA CCTTGCGTTG CGTCGGAGTA GGGGAGTGCC GCCGGACCCA CAACGCCTTC
ATGTGCCCGA GTTTCCAGGC GACCAGGGAG GAACAGCACA CGACCCGCGG TAGGGCGCAC
CTTCTCTTCG AGATGTTCCG GCGCGATTTC ATCAAGGACG GCTGGCGAAG CGTAGAGGTG
CGCGATGCGC TGGAACTATG CCTCTCCTGC AAGGGCTGCA AGGGGGAGTG CCCGGTCAAC
GTCGACATGG CCGCCTACAA GGCGGAATTT CTCCACCATC ACTACCACAA CCGCCTGCGT
CCCCGCCCCG CGTATTCCAT GGGGCTCTTC GGCATCTGGG GGCGGCTCGG CGCCGGCATG
CCGCGGCTTG CCAACCTGGT GAGCCACGCC ACGCTGCTGT CGGGGGTGGT GAAATGGATC
GGCGGCATCG CCTCCCAGCG GAGCATGCCC ACCTTCGCTC CCGAGAGCTT CACCTCGGCC
TACCGGCGCC AAGAGAAGCA GCCTGAGCAA AAGGGGAAGG AGGTGGTCCT CTACCCAGAC
ATCTTCAACG ACTGCTTCTA CCCCGAGATA CTCCACGCCG CCTGCGAGGT GCTGGAGCGT
TTCGGCTACC AGGTGATCGT ACCCGACCAA AATCCGCCGG CGGTGCGCCC CCCCATGGAT
TACGGGATGC TCGACTACGC CATGAAGCGT ATGGAAGAGG TGATCGACCA GTTGAGCCCG
TACGTGCGTA GGGGGATTCC GGTGGTGATT CTGGAGCCGA GCACGGCGGC GGTCTTTCGC
GACGAGCTTC CGGAACTGCT GCCGGAACAC CAGGACGGAA AGCGGCTGAC AGCGCACACC
TTCCTCATGA GCGAGTTCGT GCTGCGCGAA GGGCTGACGC CGCCGAACCT CCCCGGCAAG
GTGCTGCTGC AGGCGCACTG CCACGAGAAA TCGGTGTTGA GCCTGCACGC GAAGGCTGCG
CACGAGCTAT TGGCGAAGAT GGGGCTTTCC GTCGAAGAGC CGGAAAAGGG ATGCTGCGGC
ATGGCGGGAT CGTTCGGTTT CGAGAGCGGG AAGTACGAGG TCTCAATGAA GATAGCCGAG
GCCAACCTGC TGCCGGCGGT GAGGGAGGCG GGGGCGGAAA CCTACATCGT CGCCGACGGT
TTCAGCTGCC GCACCCAGAT CCAGCAGGGG GCAGGAAAAA GGGCCCTGCA CACGGCGGAA
CTGCTGCATC TTGCCTTCAC CCGCACCCTC CTCCCACCTC CAGCAAAATG A
|
|---|
| Protein sequence | MPQPEENEIF VATQLNPGAL EADLRYALDA EVRFDAGSRA LYATDASNYR QIPIGVVLPR
TTEAVIKTLE ICHRHGAPVV SRGGGTGLCG QTCNVAVVID HSKYLNRILE LDPEKGFAWV
EPGVILDQLR EQAENYHLTF GPDPATHTHN TLGGMIGNNS CGVHSVMAGR TVDNILELDV
ITYDGVRITV GETTDLELEE IIAQGGRRGE IYAGLKSIRD RQAKRIRERY PKIPRRVSGY
NLDELLPENG FNVAHALVGT EGTCVTILAA KVRLVHSPPA RSILLLGYPD VYSAGDHVPE
ILKFEPVGLE GLDDLLVKFM QKKKLHPEDI ELLPPGKGWL LVEFGGETEE ESDQKAKDAM
EALKKLKDPP SMKLFIDEKE EKRIWEVRES GLGATANVPG FPLSWPGWED AAVAPDKIGG
YLREFRKLLD RHGLNASLYG HFGDGCIHCR ISFDLFSAEG VANFTSFLDH ASDLVVSYGG
SFSAEHGDGQ SKALYLRKMY GDELIEAFRQ FKGLWDPQWK MNPGKVVDPY HPDQNLRLGV
TYDPWQPETR FRFPTDETSF ARATLRCVGV GECRRTHNAF MCPSFQATRE EQHTTRGRAH
LLFEMFRRDF IKDGWRSVEV RDALELCLSC KGCKGECPVN VDMAAYKAEF LHHHYHNRLR
PRPAYSMGLF GIWGRLGAGM PRLANLVSHA TLLSGVVKWI GGIASQRSMP TFAPESFTSA
YRRQEKQPEQ KGKEVVLYPD IFNDCFYPEI LHAACEVLER FGYQVIVPDQ NPPAVRPPMD
YGMLDYAMKR MEEVIDQLSP YVRRGIPVVI LEPSTAAVFR DELPELLPEH QDGKRLTAHT
FLMSEFVLRE GLTPPNLPGK VLLQAHCHEK SVLSLHAKAA HELLAKMGLS VEEPEKGCCG
MAGSFGFESG KYEVSMKIAE ANLLPAVREA GAETYIVADG FSCRTQIQQG AGKRALHTAE
LLHLAFTRTL LPPPAK
|
|---|
| |