| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0282 |
|---|
| Symbol | |
|---|
| ID | 6783108 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 339633 |
|---|
| End bp | 341117 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642766251 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_002137109 |
|---|
| Protein GI | 197116682 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTCTCCA TCTGTCTGCT CGTCTTCGGT ATCGGGACCT TCGCCTTCCT GACGCTTCGG
CGCGAGCAGA TGCAGCTCGT CAATTCCGCT CGCGAATCGA GCGAACTCCT CTTGAACACC
ATCGAACGCT CCCTCTACAA CTCCATGAGG ATCGGCAACA CCGAGGACGT GAAGGTGATC
CTGGAGATGG TGGGGCAGAG CGAGAACCTG GTGGGGGTGC GCATCTTCCA TCCCCACGGG
GTCATCCTGA AGTCCTCCAA CCCCAACGAG GTCGGGCGGG TGGTCGACGA GCGCGACTAC
AAGCTCTTCC TTGACAACAA GCGCGAAGGC GTCTTCAACC TTGACGGGCA CGGCGAGGTG
CTGGGGATGG TTAAGCCGAT CTACAACGAC CGTCAGTGCA ACCTCTGCCA TGGTTCCAAG
AGCCGGATCA TCGGTCTTTT GAACGTCAAT TACTCCCTGA CCGAGACACG GAACCGGATC
GTGGAACTGA CCAAGCTCTT CGTGATGTCC ACCGTCGCCA TCATCGGCTT TCTCTCCCTT
GCCATCTCGC TGGTCATGCT GAAGTTCGTC AAGAAGCCGT TAACCCAGCT TGCCAAGAAC
ATGGCGCGCG TGGAGGCGGG GGATCTCTCG GTGCGCATGA CCCCCGAGGG GAAGGACGAA
ATCGGGCGCC TGATCGTCTC CTTCGACTCC ATGGTGGATC GGCTGGACCG GGCCAAGAAG
GAGCTGGAGA ACTTCCATTT CCAGCAGATG GAGCGCGCCG ACCGCCTCGC CTCGGTGGGA
GAGATGGCCG CCGGCATCGC CCACGAGATC AAGAACCCGC TTACCGGCAT CGCCGCCGCC
ATCACGGTGC TCAAAGACGA CTTCGCCCCG GAAGACGGCC GCATCCAGAT CATCGGCGAG
GTGCTGGAGC AGATCTCCCG GCTGGACAAG ACGGTGAACG ACCTGCTCTT CTTCGGCAAG
CCCACCGTCG CCGAGCCGAC CTGCACCGAC ATCAACTCGG CGCTCAAAAA GATACTGGTC
TTCGCCTCGC AGCACCGTGG CGGCAAGAAC ATCGAAAAGC GCCTGGAACT GTCCGAAAAT
CTCCCCACCG TCTATGTGGA CCCGAAGCAG ATCCAGCAGG TCTTCCTGAA CCTGTTCCTG
AACGCGGTCC AGGCGATGCA GGCTGGGGGG ACGCTCACCG TGAAGAGCGG GCTGGCCAAG
GTCGAGGGGG TCGACATGGT GCAGGTGCGG GTGACCGACA CCGGCCAGGG GATTCCGCCG
CAGATCCTGG AGAAGATCTT CACCCCGTTT TTCACCACCA AGGCGCAGGG GACCGGTCTC
GGCCTCGCCA TCAGCCACCG CCTCATCGAG CAGCACGGCG GGAGGCTTTC CGTGGTGAGC
CAGGACGGAA TGGGAACCAC CTTCACCGTG GAACTCCCCG CCTACTGCCC CGGGCAGCCG
GGGTACTCCG GGCCTGACGC GCCCCCCCCG ACGGTGTGCC AGTAA
|
|---|
| Protein sequence | MLSICLLVFG IGTFAFLTLR REQMQLVNSA RESSELLLNT IERSLYNSMR IGNTEDVKVI
LEMVGQSENL VGVRIFHPHG VILKSSNPNE VGRVVDERDY KLFLDNKREG VFNLDGHGEV
LGMVKPIYND RQCNLCHGSK SRIIGLLNVN YSLTETRNRI VELTKLFVMS TVAIIGFLSL
AISLVMLKFV KKPLTQLAKN MARVEAGDLS VRMTPEGKDE IGRLIVSFDS MVDRLDRAKK
ELENFHFQQM ERADRLASVG EMAAGIAHEI KNPLTGIAAA ITVLKDDFAP EDGRIQIIGE
VLEQISRLDK TVNDLLFFGK PTVAEPTCTD INSALKKILV FASQHRGGKN IEKRLELSEN
LPTVYVDPKQ IQQVFLNLFL NAVQAMQAGG TLTVKSGLAK VEGVDMVQVR VTDTGQGIPP
QILEKIFTPF FTTKAQGTGL GLAISHRLIE QHGGRLSVVS QDGMGTTFTV ELPAYCPGQP
GYSGPDAPPP TVCQ
|
|---|
| |