| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0274 |
|---|
| Symbol | |
|---|
| ID | 6783100 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 331152 |
|---|
| End bp | 331838 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642766243 |
|---|
| Product | protein of unknown function DUF554 |
|---|
| Protein accession | YP_002137101 |
|---|
| Protein GI | 197116674 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1811] Uncharacterized membrane protein, possible Na+ channel or pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.637934 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCATGC AAGGAACAGC GGTAAACGCG GTGGCAATTG TTATCGGCAG CGTAGTCGGC
CTAAAGGCCG GGCACCTGAT CCCCACCCGG GTGCGGGGCA CCGTGATGGC GGGAGTGGGG
CTCGCCGTAC TTCTCATCGG GTGCCAACTG GCCCTGAAGA GCCGGGAACC GATGATCATC
ATCGGCTGCC TGATCGGCGG CGGCATCATC GGCGAGCTTT TGCGCATCGA GGAGCGCCTG
GAGAAGCTGG GGAACTGGAT CGGCGACCGT TTCCAGGGAA GCGGGCAGGT GGCCGAGGGG
TTCGTCACCG CGAGCCTTCT TTTTTGCGTC GGCGCCATGG CCATCATGGG GTCGCTGCAG
GACGGCCTGG GTTCCCGCCC CGAGATCCTC TACGCCAAGG CCGCCCTCGA CGGCATCACC
TCCGTGGCTC TCGCCTCCAC ACTAGGCGTC GGCGTCCTCT TCTCGTCATT GGCCGTTTTC
GTCTACCAGG GGGCCATCAC CCTGAGCGCG ACGCTGGCCC AGCAGCTGAT GACGCCTGCA
GTGGTGCAGG AGATGAACGC CGTAGGAGGG CTGCTGATCC TCGCCATAGG ACTCGATCTT
TTGGGGATGA AACGGGTTCC GGTGGGAAAC CTTCTTCCCG CCGTGTTCCT GGCGCCCCCC
CTGGTCATGC TCTTTGCCTC CTCCTGA
|
|---|
| Protein sequence | MIMQGTAVNA VAIVIGSVVG LKAGHLIPTR VRGTVMAGVG LAVLLIGCQL ALKSREPMII
IGCLIGGGII GELLRIEERL EKLGNWIGDR FQGSGQVAEG FVTASLLFCV GAMAIMGSLQ
DGLGSRPEIL YAKAALDGIT SVALASTLGV GVLFSSLAVF VYQGAITLSA TLAQQLMTPA
VVQEMNAVGG LLILAIGLDL LGMKRVPVGN LLPAVFLAPP LVMLFASS
|
|---|
| |