| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0273 |
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| Symbol | |
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| ID | 6783099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 327415 |
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| End bp | 330861 |
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| Gene Length | 3447 bp |
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| Protein Length | 1148 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642766242 |
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| Product | pyruvate carboxylase |
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| Protein accession | YP_002137100 |
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| Protein GI | 197116673 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1038] Pyruvate carboxylase |
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| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit
[TIGR01235] pyruvate carboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.322255 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGCAA GGAAATTCAG GAAAGTGATG GCGGCAAACC GCGGAGAGAT CGCAATCAGG
ATCTTCCGCG CCTGCACCGA GCTCGGCATC AGCACGGTGG CCATCTACTC GGAAGAGGAC
AAGCTATCCC TGCACCGCTA CAAGGCGGAC GAGGCGTACC TGGTCGGCAA GGGGAAAGCG
CCCATCGACG CCTACCTCGG CATCGACGAG ATCATCGCGC TGGCGAAGAA GCGCGAAGTC
GACGCCATTC ACCCGGGCTA CGGGTTCCTT GCCGAAAATG CCGAATTCGC CGAGAAATGC
GAGGCCAACG GCATCGCCTT CATCGGACCG ACCGCCGAGA TGCAGCGCGC CCTGGGCGAC
AAGGTCGCCG CCAGGAAGGT CGCCAAGGCG GCGGGCGTCA CCACCGTGCC CGGGACCGAG
GAGCCGATCA CCCACGAGGA AGACGCCCTC ATCTTCGCCA AGAATCACGG CTACCCCATC
ATCATCAAGG CGGCGGCGGG AGGCGGCGGC CGCGGCATGC GCGTCGCCAC CGACAAGAAG
GAACTCCTGG AGGGGCTGCA GTCCGCCTCC AGCGAGGCAA AGGCCGCCTT CGGCGACCCT
TCCGTCTTCC TGGAGCGCTA CCTGAAAAAC CCCAAGCACA TCGAGGTGCA GGTTCTGGGC
GACGCCTACG GGAACCTGGT GCACTTCTAC GAGCGCGACT GCTCGATCCA GCGCCGCCAC
CAAAAGGTGG TCGAATTCGC GCCGTCGCTG GCGCTTCCCG GCGCCACCCG CTTAGCGCTT
TGCACCGACG CGCTGAAGAT AGCGAACCAG GTGGGGTACC GTAACGCCGG CACCGTGGAG
TTCCTGCTCG ACGAGGACGG CAAGTACTAC TTCATCGAGA TGAACCCCCG CATACAGGTG
GAGCACACGG TGACCGAGAT GATCACCGGC AGAAACCTGG TGCAGGCCCA GATCCTGATC
GCGGAAGGGA AGAGGCTCTC CGACCCGGAG ATCAACATCC CGAATCAGGG GTCCATCGAG
ATGCGCGGCT ACGCCATCCA GTGTCGCATT ACCACCGAGG ACCCGGGGAA CAACTTCGCC
CCCGACTTCG GGACGCTCTC CACCTACCGC TCCTCGGCCG GATGCGGCGT GCGCCTTGAC
GCCGGTAACG CCTTCACCGG CGCCCAGATC ACCCCGCATT ACGACTCGCT GCTGGTCAAG
GTGAGCGCCT GGGGCCTTAC CTTCGCCGAG GCCGCGCACA TCATGGACCG AAGCCTCCAG
GAGTTCAGGG TGCGCGGGGT GAAGACCAAC ATCGGCTTCC TGGAGAACGT GATCACGCAC
CCGGTGTTCC TCGCGGGGGG CTGCAACACC TCGTTCATCG ACCAGCACCC CGAGCTCCTC
GTCATCCCGG AGAAGAAGGA CCGCGCCAAC AAGGTGCTGC AGTTCCTGGG GGACGTCATC
GTCAACGGCT CCCCGGGGGT CGCGAAGCCT TTGCGCTCCG CGGAGCTCAT CGAGGCCACC
GTGCCGCAGA TCGCCCCCTT CGCCCAAAGG CCGAAAGGGA CCCGCGACAT CCTGCGCGAG
AAGGGTGCCG AGGGGCTTTC CAAGTGGGTC ATGGAACAAA ATCACCTGCT CTTGACCGAC
ACCACCATGC GCGACGCGCA CCAGTCGCTG CTGGCCACCC GCGTCAGAAC CCACGACCTG
TTGAAGATCG CCGAGCCGAC CTCGCACCTG GCCAGCGACC TCTTCTCGCT GGAACTCTGG
GGCGGGGCGA CCTTCGACGT CACCATGCGC TTTTTGAAGG AAGACCCCTG GCAGAGGCTG
CACGCGCTCT CCGAGGCGAT CCCCAACGTG CTGTTCCAGA TGCTCCTTCG CGGCTCCAAC
GCCGTGGGGT ACACCAACTA CCCGGACAAC GTGGTGCAGC GCTTCGTGGC CCAGGCGGCC
GAATCCGGCG TCGACGTCTT CCGCGTCTTC GACTCGCTCA ACTGGACCCG CGGCATGCAG
GTGGCCATGG AGGCGGTGCA GAAATCGGGC AAGATCTGCG AGGCCGCCAT CTGCTACACC
GGCGACATCT CCGACCCCAC CCGCACCAAG TACCCTCTCT CCTACTACGT CTCCATGGCA
AAGGAGCTGG AGAAGATGGG GGCGCACATC CTCGCCATCA AGGACATGGC CGGGCTCCTG
AAGCCGTACG CCGGCTACCA GCTGGTCAAG GCGCTCAAGG AGGAGATCGG CATCCCGGTG
CACCTGCACA CCCACGACAC CTCCGGAAAC GGCGGCGCCC TCCTCGTGAT GGCGGCGCAG
GCGGGTGTCG ACATCGTCGA CGCGGCGCTT TCCTCCATCT CCGGCCTCAC CTCGCAGCCC
AACCTGAACG CGCTGGTGGC GACCCTCAAG GGGACCGAGC TCGATCCCAA GGTGAACGAG
CACGGCCTGC AGCAGCTCGC CAACTACTGG GAGACGGTGC GCGACTTCTA CGCCCCGTTC
GAATCCGGGC TCAAAAGCGG CACCGCCGAG GTGTACCACC ACGAGATCCC GGGCGGGCAG
TACTCCAACT ACAAGCCGCA GGTCGCGGGA CTCGGGCTTT TGGAGCGCTG GGAAGAGTGC
AAGGAGATGT ACCACAAGGT AAACGTGCTC TTCGGCGACG TGGTGAAGGT GACCCCTTCC
TCCAAGGTCG TCGGCGACAT GGCGATGTTC CTGGTCAAGA ACAACCTGGA GCCCGCAGAC
GTCTTCGTGC CGGGCGCGGA TCTCGCCTTC CCCGAGTCGG TGGTCGGCTT CTTCAAGGGG
ATGATCGGCC AACCGTACCA GGGGTTCCCC GAGGAGCTGC AGAAGATCGT CCTGAAAGGG
CAGGAGCCCA TCACCTGCCG CCCGGGCGAG CTCCTGGAGC CGACGGATTT CGAGAAGGAG
CGCGCCACGG CTGAAGCCAA GGCGGGGCAC CCGGTGAACG ACGAGGAACT GATGTCCTAC
ATCATGTACC CGAGCGTCTA CGTCGAATAC GCGAAGCACC GCCAGGAGTA CTCCGACGTC
TCCGTGATCC CGACCCCGGT CTTCTTCTAC GGCCTTGAGC CGGGGCAGGA GACCTCCATC
GAGCTCCAGC CCGGAAAGAC CTTGATCGTC AAGCTGAATG CGGTCGGCAA GACCCAGCCC
GACGGCACCA AGCAGATCTA CTTCGAGCTC AACGGCAACT CAAGGAGCGT CACCGTGCGC
GACCAGTCGG TGCAAAGCGA CGACTGCGGC CACGAAAAGG CCGACAAGTC GAACCCCAAG
CACGTAGGGG TGCCGATGCC GGGGAAGGTG ATCAAGATGA ACGTGAAGAC CGGCGACTCC
GTCAAGGCGG GGGATATCCT CGCCGTCACC GAGGCCATGA AGATGGAGAC CAACATCAAG
GCCAAGGAAG ACGGGACCGT CTTCGAGGTG CGCTGCAAGG AGGGGGGCAA GGTCGAGAAA
GAGGAACTTC TGATCGTGAT GGCCTGA
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| Protein sequence | MEARKFRKVM AANRGEIAIR IFRACTELGI STVAIYSEED KLSLHRYKAD EAYLVGKGKA
PIDAYLGIDE IIALAKKREV DAIHPGYGFL AENAEFAEKC EANGIAFIGP TAEMQRALGD
KVAARKVAKA AGVTTVPGTE EPITHEEDAL IFAKNHGYPI IIKAAAGGGG RGMRVATDKK
ELLEGLQSAS SEAKAAFGDP SVFLERYLKN PKHIEVQVLG DAYGNLVHFY ERDCSIQRRH
QKVVEFAPSL ALPGATRLAL CTDALKIANQ VGYRNAGTVE FLLDEDGKYY FIEMNPRIQV
EHTVTEMITG RNLVQAQILI AEGKRLSDPE INIPNQGSIE MRGYAIQCRI TTEDPGNNFA
PDFGTLSTYR SSAGCGVRLD AGNAFTGAQI TPHYDSLLVK VSAWGLTFAE AAHIMDRSLQ
EFRVRGVKTN IGFLENVITH PVFLAGGCNT SFIDQHPELL VIPEKKDRAN KVLQFLGDVI
VNGSPGVAKP LRSAELIEAT VPQIAPFAQR PKGTRDILRE KGAEGLSKWV MEQNHLLLTD
TTMRDAHQSL LATRVRTHDL LKIAEPTSHL ASDLFSLELW GGATFDVTMR FLKEDPWQRL
HALSEAIPNV LFQMLLRGSN AVGYTNYPDN VVQRFVAQAA ESGVDVFRVF DSLNWTRGMQ
VAMEAVQKSG KICEAAICYT GDISDPTRTK YPLSYYVSMA KELEKMGAHI LAIKDMAGLL
KPYAGYQLVK ALKEEIGIPV HLHTHDTSGN GGALLVMAAQ AGVDIVDAAL SSISGLTSQP
NLNALVATLK GTELDPKVNE HGLQQLANYW ETVRDFYAPF ESGLKSGTAE VYHHEIPGGQ
YSNYKPQVAG LGLLERWEEC KEMYHKVNVL FGDVVKVTPS SKVVGDMAMF LVKNNLEPAD
VFVPGADLAF PESVVGFFKG MIGQPYQGFP EELQKIVLKG QEPITCRPGE LLEPTDFEKE
RATAEAKAGH PVNDEELMSY IMYPSVYVEY AKHRQEYSDV SVIPTPVFFY GLEPGQETSI
ELQPGKTLIV KLNAVGKTQP DGTKQIYFEL NGNSRSVTVR DQSVQSDDCG HEKADKSNPK
HVGVPMPGKV IKMNVKTGDS VKAGDILAVT EAMKMETNIK AKEDGTVFEV RCKEGGKVEK
EELLIVMA
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