Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0273 |
Symbol | |
ID | 6783099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 327415 |
End bp | 330861 |
Gene Length | 3447 bp |
Protein Length | 1148 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642766242 |
Product | pyruvate carboxylase |
Protein accession | YP_002137100 |
Protein GI | 197116673 |
COG category | [C] Energy production and conversion |
COG ID | [COG1038] Pyruvate carboxylase |
TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit [TIGR01235] pyruvate carboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.322255 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGCAA GGAAATTCAG GAAAGTGATG GCGGCAAACC GCGGAGAGAT CGCAATCAGG ATCTTCCGCG CCTGCACCGA GCTCGGCATC AGCACGGTGG CCATCTACTC GGAAGAGGAC AAGCTATCCC TGCACCGCTA CAAGGCGGAC GAGGCGTACC TGGTCGGCAA GGGGAAAGCG CCCATCGACG CCTACCTCGG CATCGACGAG ATCATCGCGC TGGCGAAGAA GCGCGAAGTC GACGCCATTC ACCCGGGCTA CGGGTTCCTT GCCGAAAATG CCGAATTCGC CGAGAAATGC GAGGCCAACG GCATCGCCTT CATCGGACCG ACCGCCGAGA TGCAGCGCGC CCTGGGCGAC AAGGTCGCCG CCAGGAAGGT CGCCAAGGCG GCGGGCGTCA CCACCGTGCC CGGGACCGAG GAGCCGATCA CCCACGAGGA AGACGCCCTC ATCTTCGCCA AGAATCACGG CTACCCCATC ATCATCAAGG CGGCGGCGGG AGGCGGCGGC CGCGGCATGC GCGTCGCCAC CGACAAGAAG GAACTCCTGG AGGGGCTGCA GTCCGCCTCC AGCGAGGCAA AGGCCGCCTT CGGCGACCCT TCCGTCTTCC TGGAGCGCTA CCTGAAAAAC CCCAAGCACA TCGAGGTGCA GGTTCTGGGC GACGCCTACG GGAACCTGGT GCACTTCTAC GAGCGCGACT GCTCGATCCA GCGCCGCCAC CAAAAGGTGG TCGAATTCGC GCCGTCGCTG GCGCTTCCCG GCGCCACCCG CTTAGCGCTT TGCACCGACG CGCTGAAGAT AGCGAACCAG GTGGGGTACC GTAACGCCGG CACCGTGGAG TTCCTGCTCG ACGAGGACGG CAAGTACTAC TTCATCGAGA TGAACCCCCG CATACAGGTG GAGCACACGG TGACCGAGAT GATCACCGGC AGAAACCTGG TGCAGGCCCA GATCCTGATC GCGGAAGGGA AGAGGCTCTC CGACCCGGAG ATCAACATCC CGAATCAGGG GTCCATCGAG ATGCGCGGCT ACGCCATCCA GTGTCGCATT ACCACCGAGG ACCCGGGGAA CAACTTCGCC CCCGACTTCG GGACGCTCTC CACCTACCGC TCCTCGGCCG GATGCGGCGT GCGCCTTGAC GCCGGTAACG CCTTCACCGG CGCCCAGATC ACCCCGCATT ACGACTCGCT GCTGGTCAAG GTGAGCGCCT GGGGCCTTAC CTTCGCCGAG GCCGCGCACA TCATGGACCG AAGCCTCCAG GAGTTCAGGG TGCGCGGGGT GAAGACCAAC ATCGGCTTCC TGGAGAACGT GATCACGCAC CCGGTGTTCC TCGCGGGGGG CTGCAACACC TCGTTCATCG ACCAGCACCC CGAGCTCCTC GTCATCCCGG AGAAGAAGGA CCGCGCCAAC AAGGTGCTGC AGTTCCTGGG GGACGTCATC GTCAACGGCT CCCCGGGGGT CGCGAAGCCT TTGCGCTCCG CGGAGCTCAT CGAGGCCACC GTGCCGCAGA TCGCCCCCTT CGCCCAAAGG CCGAAAGGGA CCCGCGACAT CCTGCGCGAG AAGGGTGCCG AGGGGCTTTC CAAGTGGGTC ATGGAACAAA ATCACCTGCT CTTGACCGAC ACCACCATGC GCGACGCGCA CCAGTCGCTG CTGGCCACCC GCGTCAGAAC CCACGACCTG TTGAAGATCG CCGAGCCGAC CTCGCACCTG GCCAGCGACC TCTTCTCGCT GGAACTCTGG GGCGGGGCGA CCTTCGACGT CACCATGCGC TTTTTGAAGG AAGACCCCTG GCAGAGGCTG CACGCGCTCT CCGAGGCGAT CCCCAACGTG CTGTTCCAGA TGCTCCTTCG CGGCTCCAAC GCCGTGGGGT ACACCAACTA CCCGGACAAC GTGGTGCAGC GCTTCGTGGC CCAGGCGGCC GAATCCGGCG TCGACGTCTT CCGCGTCTTC GACTCGCTCA ACTGGACCCG CGGCATGCAG GTGGCCATGG AGGCGGTGCA GAAATCGGGC AAGATCTGCG AGGCCGCCAT CTGCTACACC GGCGACATCT CCGACCCCAC CCGCACCAAG TACCCTCTCT CCTACTACGT CTCCATGGCA AAGGAGCTGG AGAAGATGGG GGCGCACATC CTCGCCATCA AGGACATGGC CGGGCTCCTG AAGCCGTACG CCGGCTACCA GCTGGTCAAG GCGCTCAAGG AGGAGATCGG CATCCCGGTG CACCTGCACA CCCACGACAC CTCCGGAAAC GGCGGCGCCC TCCTCGTGAT GGCGGCGCAG GCGGGTGTCG ACATCGTCGA CGCGGCGCTT TCCTCCATCT CCGGCCTCAC CTCGCAGCCC AACCTGAACG CGCTGGTGGC GACCCTCAAG GGGACCGAGC TCGATCCCAA GGTGAACGAG CACGGCCTGC AGCAGCTCGC CAACTACTGG GAGACGGTGC GCGACTTCTA CGCCCCGTTC GAATCCGGGC TCAAAAGCGG CACCGCCGAG GTGTACCACC ACGAGATCCC GGGCGGGCAG TACTCCAACT ACAAGCCGCA GGTCGCGGGA CTCGGGCTTT TGGAGCGCTG GGAAGAGTGC AAGGAGATGT ACCACAAGGT AAACGTGCTC TTCGGCGACG TGGTGAAGGT GACCCCTTCC TCCAAGGTCG TCGGCGACAT GGCGATGTTC CTGGTCAAGA ACAACCTGGA GCCCGCAGAC GTCTTCGTGC CGGGCGCGGA TCTCGCCTTC CCCGAGTCGG TGGTCGGCTT CTTCAAGGGG ATGATCGGCC AACCGTACCA GGGGTTCCCC GAGGAGCTGC AGAAGATCGT CCTGAAAGGG CAGGAGCCCA TCACCTGCCG CCCGGGCGAG CTCCTGGAGC CGACGGATTT CGAGAAGGAG CGCGCCACGG CTGAAGCCAA GGCGGGGCAC CCGGTGAACG ACGAGGAACT GATGTCCTAC ATCATGTACC CGAGCGTCTA CGTCGAATAC GCGAAGCACC GCCAGGAGTA CTCCGACGTC TCCGTGATCC CGACCCCGGT CTTCTTCTAC GGCCTTGAGC CGGGGCAGGA GACCTCCATC GAGCTCCAGC CCGGAAAGAC CTTGATCGTC AAGCTGAATG CGGTCGGCAA GACCCAGCCC GACGGCACCA AGCAGATCTA CTTCGAGCTC AACGGCAACT CAAGGAGCGT CACCGTGCGC GACCAGTCGG TGCAAAGCGA CGACTGCGGC CACGAAAAGG CCGACAAGTC GAACCCCAAG CACGTAGGGG TGCCGATGCC GGGGAAGGTG ATCAAGATGA ACGTGAAGAC CGGCGACTCC GTCAAGGCGG GGGATATCCT CGCCGTCACC GAGGCCATGA AGATGGAGAC CAACATCAAG GCCAAGGAAG ACGGGACCGT CTTCGAGGTG CGCTGCAAGG AGGGGGGCAA GGTCGAGAAA GAGGAACTTC TGATCGTGAT GGCCTGA
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Protein sequence | MEARKFRKVM AANRGEIAIR IFRACTELGI STVAIYSEED KLSLHRYKAD EAYLVGKGKA PIDAYLGIDE IIALAKKREV DAIHPGYGFL AENAEFAEKC EANGIAFIGP TAEMQRALGD KVAARKVAKA AGVTTVPGTE EPITHEEDAL IFAKNHGYPI IIKAAAGGGG RGMRVATDKK ELLEGLQSAS SEAKAAFGDP SVFLERYLKN PKHIEVQVLG DAYGNLVHFY ERDCSIQRRH QKVVEFAPSL ALPGATRLAL CTDALKIANQ VGYRNAGTVE FLLDEDGKYY FIEMNPRIQV EHTVTEMITG RNLVQAQILI AEGKRLSDPE INIPNQGSIE MRGYAIQCRI TTEDPGNNFA PDFGTLSTYR SSAGCGVRLD AGNAFTGAQI TPHYDSLLVK VSAWGLTFAE AAHIMDRSLQ EFRVRGVKTN IGFLENVITH PVFLAGGCNT SFIDQHPELL VIPEKKDRAN KVLQFLGDVI VNGSPGVAKP LRSAELIEAT VPQIAPFAQR PKGTRDILRE KGAEGLSKWV MEQNHLLLTD TTMRDAHQSL LATRVRTHDL LKIAEPTSHL ASDLFSLELW GGATFDVTMR FLKEDPWQRL HALSEAIPNV LFQMLLRGSN AVGYTNYPDN VVQRFVAQAA ESGVDVFRVF DSLNWTRGMQ VAMEAVQKSG KICEAAICYT GDISDPTRTK YPLSYYVSMA KELEKMGAHI LAIKDMAGLL KPYAGYQLVK ALKEEIGIPV HLHTHDTSGN GGALLVMAAQ AGVDIVDAAL SSISGLTSQP NLNALVATLK GTELDPKVNE HGLQQLANYW ETVRDFYAPF ESGLKSGTAE VYHHEIPGGQ YSNYKPQVAG LGLLERWEEC KEMYHKVNVL FGDVVKVTPS SKVVGDMAMF LVKNNLEPAD VFVPGADLAF PESVVGFFKG MIGQPYQGFP EELQKIVLKG QEPITCRPGE LLEPTDFEKE RATAEAKAGH PVNDEELMSY IMYPSVYVEY AKHRQEYSDV SVIPTPVFFY GLEPGQETSI ELQPGKTLIV KLNAVGKTQP DGTKQIYFEL NGNSRSVTVR DQSVQSDDCG HEKADKSNPK HVGVPMPGKV IKMNVKTGDS VKAGDILAVT EAMKMETNIK AKEDGTVFEV RCKEGGKVEK EELLIVMA
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