Gene Gbem_0272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0272 
Symbol 
ID6783098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp323423 
End bp326764 
Gene Length3342 bp 
Protein Length1113 aa 
Translation table11 
GC content62% 
IMG OID642766241 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_002137099 
Protein GI197116672 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTCGTCA CCAGCATGAA AACCAAAATG ACACTAGCCG TCTTCCTGCT GGTCGGCTTC 
CTGATGTCGG TGACGGCCGT GAGCTCGGTG CTGTACTACG AGCAAAGATT CAGACGCAAC
ATTTCCCTGC AGCAGTCCAC GCTCCTCGAT TCCCTGGCCT ATCAGGTAGA CAACCGCATC
TTCGACTTCA TGTCGGACCT AGACCAGCTC GCCGCCGGCA TCACCCCTGA AACGCTGGGC
AGCCAAAAGC TGGCACAGCA GCTGCTCGAT GCGCATAAAA AGCAGCGCGC TTTCTTCGAC
AATTCCCTCT TCATCTTCTC GAACACCGGG AGGCTCATCG CCGCCAACCC GGAGGGACTC
AACTTCATCG GCAAAGACTT CTCCTTCCGG GACTACTTCA AGCAGACCAT GCAGACGGGG
AAGATGTCCG TCTCAGCGCC TTTCGTCTCG ATCCAGAAGC AAAGCTACCC CATCATCATG
TTCAGTACCC CGGTATACGA TTCCAAGCAC CGGATCATCG GCATATTGGG GGGGAGCATC
GACCTGCGCC GGCAGCGGTA CCTGCAGTCG CTGGCCGCGC TGAAACTGGG GCAGAAGGGT
TTCCTCTCCC TCTACGACAG CAACCGCTAC GTGCTGATGC ACCCGAACCC CAAGCGGGTG
CTGCGCCGCG ACCCCCCCGG AAGCAACGAC ATGGTGGACC GGGCGATCGC AGGGTACGAG
GGGACCAGGG AGAGCGGCAC CGTAGCCGGG CTGCCGGTGC TGCGCTCGGT GAAGCGGTTG
AAATCCACCA ACTGGATCAT GGCTGTCAGC TACCCGCTGA GCGAGGTGTA CGGGCCGCTT
TACACGGCGA GGAACTACTT CCTGGCGGGC TCGCTCGCCG CGTCGCTTCT CTCCATCCTG
ATCGTCTGGC CCTTCATGGG GTACCTGACC CGGCCTCTTT TGTCGTTCAC CCGCCACCTG
GAGCAGCTCC CCTCGCTTAA GGGCTCCCGG CGGCTCGCGC CGGTGATTTC CGACGACGAG
ATCGGTCAGA TGGCGCGGAC CTTCAACAAG ATGCTCTTGG AACAGGAACG CTCCCGCGAC
TTCTACCTGA CGCTGTTCGA GAACTTCCCC GCCATGGTCT GGCGCGCGGG AACCGACGGC
AAGTGCGACT ACTTCAACCA GACTTGGCTG GAGTTCACCG GGCGGCCCCT GGAAGAGGAA
CAGGGAGACG GCTGGATGCA AGGGGTGCAT CCGGAAGAGC TGGATTTTTG CTGCCGCACC
TACCTCGACG CCGTCGAAAA CCGCAGGCCC TTCCAGATGG AATACCGGCT GCGGCACAGA
AGCGGCAGCT ACCGCTGGAT CACCGACATG GGGCGCCCCT TCTACGGTAT CGACGGCGAG
TTCGTCGGGT ACATCGGCAC CTGCTACGAC GTGACCGAAC GGCAGGAGGC GGCCGACAAG
ATCCTCAAGC TGTCGCGGGT GATCGAACAA AGCCCAAACG CGGTGCTGAT AGCGACGCTC
GACGGCACCA TCGAATACGT CAACCCCATG ACGGTCGAGG CCACAGGATA TGAAGTCGCG
GAGCTGGTGG GGAGCGACAT GAAACGGCTC CTGCCGCACG AGGCCCAGCT CGGCTTCAAG
CTGGCATTGC GCGAACTGGT GCGGCGAGGC AAGGAATGGC GCGGCGAAAT CCCGGCCCGC
CGGAAAGAGG GCGCCATTTT CTGGGAACAG GTCACCCTTT CCCCCATCAA GACCATGGAC
GGCAAGGCCA CGCACCTCGT CTGCATCAAG GAGGACATCA CCCAGCGCCG GCAGTTCGAG
CTATCGCTCA AGGAGTCGGA AGAGCGATAC CGCCTGCTGT TCGAGAACAA CCCGCACCCG
ATGTGGGCCT ACGACCTGAA GGCCCTCTCC TTCCTGGCGG TGAACAACGC GGCGCTCAGG
CACTACGGTT ACTCCATGCA GGAGTTCCTG GAGATGAAGC TGAACGACCT GTCGGCGCAC
TCTTCTGAGG GGTTGGAACT GCTCCCCCAG GGGGAGACAA GCACAGCGGG TGCCCCGCTC
AAGCGCCACG TGAAAAAAGA CGGTAGCGTC ATTTTGGTGG AGACCATATC GCAGGTGATG
AAATTCGCCG GGGTCGACGC CGAGATCGTC ATGGTGCACG ACGTAACCGA GAAGCTCCGG
GCGGAGCAGG AGAAACTGGC GCTGGAGCAC CAGCTCACCC AGTCCCAGAA GATGGAGGCC
ATCGGCACCC TGACCGGCGG CATAGCACAC GACTTCAACA ACATCCTCAC CGCCATCATC
GGCTACACCA CCATGATGCA GCTGGAACTG GACGAGGAGC ACCCGCTGCA GCGCAAGGTA
GGCGAGATCC TGCGAGCTTC CGAGCGCGCG GCGAGCCTGA CCCGGAGCCT TTTGGCCTAC
AGCAGGAGGC AGGCCGGCAA CCCCGCGCCC ACCGGGCTCA ACGCCATCAT CAACAACGTC
GACATCCTTT TGCAGCGCCT GATCCCGGAG AACATCGAGT TGAGGTCGCA GCTTGCGCCG
GAGGAGCTCT CCATCATGGC GGACTCCGGC CAGATCGAGC AGGTGATCAT GAACCTGGTG
GTGAACGCCC GGGACGCCAT GCCGGAGGGG GGGGTGCTGA GCCTGTCGAC TGAGAGCATG
GCTCTGGACC GGGAGTTCGT GGCCAAGCAC GGCTACGGCC GCCCGGGGAG CTACGCCCTT
TTGGCGGTCG CCGATTCCGG GGTCGGCATG GATGAAAAGA CCAGGGACAG GATCTTCGAG
CCCTTCTTCA CCACCAAGGC GCCGGGCAAG GGGACCGGCC TGGGGCTGGC CATGGTGTAC
GGGATAGTGA AACAGCACGC CGGCTTCATC AACTGCTACA GCGAGCCGGG GCACGGCACC
GTTTTCAGGA TCTACCTGCC GCTCATCGAT GCGCCTGCCG AGATGGAGGC GGCCCAGGCG
GACCAGGAAC TGCGGGGTGG GGACGAGACC ATCCTGCTGG TCGAGGATGA CGCGGTAATC
AGGGAGATGG TGGGAGAGCT CCTGGAGGAA TTCGGCTATC GGGTGATCAA GGCAGTGGAC
GGGGAAGATG CGGTGCAGAC GTTCCGGGGG GCAGCCGCGG AGGTGCAGTT GGTGATCCTG
GACGTGATCA TGCCCAAGCG AAACGGCAAA GAGGCGTACG ACGAGATCTC CCGGATCAGG
CCGGGGGTGA AGGCGTTGTT CATGAGCGGT TACACCGCGG ACATCATCAC CGACAGCCTG
ATCAAGGGCG ACCCGCGCCA CTTCGTGTCC AAGCCGATCA GCATCAGCGA ATTGCTGGGT
AAGGTGAGGG ACCTGCTGGA CGAGCAACTT AACTGCAGAT AA
 
Protein sequence
MLVTSMKTKM TLAVFLLVGF LMSVTAVSSV LYYEQRFRRN ISLQQSTLLD SLAYQVDNRI 
FDFMSDLDQL AAGITPETLG SQKLAQQLLD AHKKQRAFFD NSLFIFSNTG RLIAANPEGL
NFIGKDFSFR DYFKQTMQTG KMSVSAPFVS IQKQSYPIIM FSTPVYDSKH RIIGILGGSI
DLRRQRYLQS LAALKLGQKG FLSLYDSNRY VLMHPNPKRV LRRDPPGSND MVDRAIAGYE
GTRESGTVAG LPVLRSVKRL KSTNWIMAVS YPLSEVYGPL YTARNYFLAG SLAASLLSIL
IVWPFMGYLT RPLLSFTRHL EQLPSLKGSR RLAPVISDDE IGQMARTFNK MLLEQERSRD
FYLTLFENFP AMVWRAGTDG KCDYFNQTWL EFTGRPLEEE QGDGWMQGVH PEELDFCCRT
YLDAVENRRP FQMEYRLRHR SGSYRWITDM GRPFYGIDGE FVGYIGTCYD VTERQEAADK
ILKLSRVIEQ SPNAVLIATL DGTIEYVNPM TVEATGYEVA ELVGSDMKRL LPHEAQLGFK
LALRELVRRG KEWRGEIPAR RKEGAIFWEQ VTLSPIKTMD GKATHLVCIK EDITQRRQFE
LSLKESEERY RLLFENNPHP MWAYDLKALS FLAVNNAALR HYGYSMQEFL EMKLNDLSAH
SSEGLELLPQ GETSTAGAPL KRHVKKDGSV ILVETISQVM KFAGVDAEIV MVHDVTEKLR
AEQEKLALEH QLTQSQKMEA IGTLTGGIAH DFNNILTAII GYTTMMQLEL DEEHPLQRKV
GEILRASERA ASLTRSLLAY SRRQAGNPAP TGLNAIINNV DILLQRLIPE NIELRSQLAP
EELSIMADSG QIEQVIMNLV VNARDAMPEG GVLSLSTESM ALDREFVAKH GYGRPGSYAL
LAVADSGVGM DEKTRDRIFE PFFTTKAPGK GTGLGLAMVY GIVKQHAGFI NCYSEPGHGT
VFRIYLPLID APAEMEAAQA DQELRGGDET ILLVEDDAVI REMVGELLEE FGYRVIKAVD
GEDAVQTFRG AAAEVQLVIL DVIMPKRNGK EAYDEISRIR PGVKALFMSG YTADIITDSL
IKGDPRHFVS KPISISELLG KVRDLLDEQL NCR