Gene Gbem_0254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0254 
Symbol 
ID6783080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp299775 
End bp301136 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content60% 
IMG OID642766223 
Producthypothetical protein 
Protein accessionYP_002137081 
Protein GI197116654 
COG category[S] Function unknown 
COG ID[COG2718] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.164837 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGATC TGGGAAAATA CCTCGAAGAA CTGAAGGAGA AGGGCCTGGA TCCCGAGCGG 
TATGCGCGGT ATCTCGACGA ACTCGCGGTC ACTCGCGACG TCCCAACGTC CGACAGGCGC
GGTCCTTTTC CAAACTTCTC CAAGAGTCTC TACTCCTGGC AGGACTTGGC CGTGCTGCAA
GACCAGGGGA GGGTCCCTAA CTCTTACCAG TGCCACATGA AGGCGTTGGA CGAACTCCTG
GAGCGGGACC GGCAGCGCGA GAAGGACGGC TTCCCCAGGA AGATCAAAGT GGGGCGGCTG
ATCAAGCCGG GCAAAGGGGG GAAGGGGAAG ATCGTTGTTG TTCCTTCCAC CGAAGAGGAG
AAGTTCCTGC ACGACCCCAC CATACGGCCT CCGGGAGAGG GTGGTTCCAC CGGGGGGAGC
GGCAAGGGTG ACGAAGGGGA GGTCATCGGC GAACAGAAGG TGCGGGAGAC CGGCGAGGAG
CCGGGGCAGG GTCCGGGACA GGGAGAGGGG GAATCCCACG AGATGGGGGC CTCCGCCTAC
GAGCTGGGCA AAGTGCTGAC CGAGCAGTTC CAGCTCCCCA ACCTGAAGGA AAAAGGGAAA
AAGCGCTCCT TCACCCGTTA CATCTACGAT CTCACCGACC GCAACCGCGG CTCCGGTCAG
GTGCTGGACA AGAAGGCGAC ACTTAGAAAG ATCGTGGAGA CCAATATCTC GCTCGGGAAC
GTACCGGACC CAGGCGACAT GGATCCGACC CGCTTTCTCA TCTCGCCGCG CGACAAGGTG
TACCGCATCT TTTCCCAGGA AAAGGATTAC GAGCCGCAGG CTATGGTCTT TTTCCTGCGC
GACTACTCCG GTTCGATGGC CGGCAAGGTG ACCGAACTGG TCGCGACCCA GCACGTGATG
ATCTACAGCT GGCTTTTGTA CCAGTACGCC GGGCAGGTAG AATCGCGCTT CATCCTGCAC
GATACCGAGG CCAAAGAGGT TCCCGATTTC GACACCTACT ACAACTCCCG GGTCGCCGGG
GGGACAGAAG TGGCGAGCGC GTACAAGCTG GTCAACGAGA TCGTGGCCAA GGAGAACCTC
GCCGCCGACT ACAACATTTA TGTATTCCAC GGCACCGACG GCGACGACTG GGACACCGGC
GGAGACAAGT CAATCCCGGA GCTGGTCAAG ATCCTTTCCT ACGTGAGCCG CATGGGGGTG
ACCATCGCCG AGCACGCGGG GACCCAATGG ACCGAGGTGG CGCGTTACCT GGAGAACTCT
GGGCTTTTGC GCGACAAGCC GGACCTCTTG CGGCTGGACG TGATGCACGA GGACGCCGAG
GAGTCGCGGG TGATCGAGGG GATCAAAAAG CTCATCTCTT AG
 
Protein sequence
MKDLGKYLEE LKEKGLDPER YARYLDELAV TRDVPTSDRR GPFPNFSKSL YSWQDLAVLQ 
DQGRVPNSYQ CHMKALDELL ERDRQREKDG FPRKIKVGRL IKPGKGGKGK IVVVPSTEEE
KFLHDPTIRP PGEGGSTGGS GKGDEGEVIG EQKVRETGEE PGQGPGQGEG ESHEMGASAY
ELGKVLTEQF QLPNLKEKGK KRSFTRYIYD LTDRNRGSGQ VLDKKATLRK IVETNISLGN
VPDPGDMDPT RFLISPRDKV YRIFSQEKDY EPQAMVFFLR DYSGSMAGKV TELVATQHVM
IYSWLLYQYA GQVESRFILH DTEAKEVPDF DTYYNSRVAG GTEVASAYKL VNEIVAKENL
AADYNIYVFH GTDGDDWDTG GDKSIPELVK ILSYVSRMGV TIAEHAGTQW TEVARYLENS
GLLRDKPDLL RLDVMHEDAE ESRVIEGIKK LIS