| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0240 |
|---|
| Symbol | |
|---|
| ID | 6783065 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 283882 |
|---|
| End bp | 284622 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642766208 |
|---|
| Product | 16S ribosomal RNA methyltransferase RsmE |
|---|
| Protein accession | YP_002137067 |
|---|
| Protein GI | 197116640 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000270837 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAGTT TCTTTCTCGG CGACAACGCC ATCTGCGGCG ACAGCGTGAC CATCACCGGA
GAGCTTTACC GCCACATGGC GCGCGTGCTG CGCATTAAAC AAGGGAGCGA GGTGGAGCTC
ATCGAGGACG GCGACTCCCG TCACCGGGGA ACCGTCGAGG AGGTGGGGGC GAAAAGCCTC
ACGGTGCGCA TCAGCGCCAG CGCCGCTCCT GCCGCCGAGG AACCGGGGCT GCGCATCACG
CTCCTGCAGG GGATGCCCAA GGGGGAGAAG CTCGACCTGA TCCTGCAGAA ATGCACCGAG
CTCGGGGTCG CCGAAGTGGT CGCCTTTGAC GCGGCACGCT CAGTGGTGAA GCTGCGCGGG
GATCGAAGCG CCACCCGGCT CGCCCGTTAC GAAAAGATAG TGCGGGAGGC CGCCCGGCAG
TCCGGGCGGC GTTCTGCGCC GAAGGTGGCC CTGGGAGGGA CCCTCGCCGA TGTCCTGGCT
GATTCACACC ATGAGGTAAA GCTGCTTCTT TACGAGGGGG AAGAGAAGAC GACCCTGCAC
GGCTGCTTCG GCGCTTTCGA GGCACCGGAG AGCGTGGCGG TCGTGGTGGG ACCGGAAGGG
GGATTGGCCC CCGAGGAGGT GCGGCAGGCG CTGGCGGCAG GGTTCACCCC GGTCACACTG
GGAAAGAGGA TCCTGCGCAC CGAGACCGCC GGGCTCGCCA TGCTGTCCAT CCTGCAGTTT
CACTGGGGGG ACATGGGGTA G
|
|---|
| Protein sequence | MRSFFLGDNA ICGDSVTITG ELYRHMARVL RIKQGSEVEL IEDGDSRHRG TVEEVGAKSL
TVRISASAAP AAEEPGLRIT LLQGMPKGEK LDLILQKCTE LGVAEVVAFD AARSVVKLRG
DRSATRLARY EKIVREAARQ SGRRSAPKVA LGGTLADVLA DSHHEVKLLL YEGEEKTTLH
GCFGAFEAPE SVAVVVGPEG GLAPEEVRQA LAAGFTPVTL GKRILRTETA GLAMLSILQF
HWGDMG
|
|---|
| |