Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0232 |
Symbol | ubiA |
ID | 6783057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 276389 |
End bp | 277258 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642766200 |
Product | prenyltransferase |
Protein accession | YP_002137059 |
Protein GI | 197116632 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
TIGRFAM ID | [TIGR01475] putative 4-hydroxybenzoate polyprenyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATTGT ACGCCAGGAC CAGAGTCTTC CTGGAGATGA TAAAGTTCAG CCACACCATT TTCGCACTAC CCTTCGCCTT CACCGGGGCG CTCTTGGCGG CAGGCGGGCT TCCCACGGTA TCCCAGGCGG GGTGGATCGT CTGCGCCATG GTGGGTGCGC GCACCGCGGC CATGGGGCTC AACCGGGTGA TAGACGCGGA GATCGACGCC AGGAATCCGC GCACCGCCGG TCGCGCCATC CCCGCGGGGC TTCTGGGTCG GGGCGCGGTG ATCTGCTTCA TCGTTCTTTC CGTGCTGCTC ATGCTTTTCG CCGCCCGGAT GCTGAACCCG CTCTGCCTTT ACCTTTCGCC GGTAGCCCTC GGTTTCATCC TGCTCTACTC CTACTGCAAG CGCTTCACGG CGCTCGCGCA CGTGGTCCTC GGTATCTGCC TCGCGGGGGC TCCGCTGGGC GCCTGGATCG CCATACGCGG CAGCGCCGAC CTCCCGGCAT ACCTCCTTGC CTTCGCGGTT CTCTTCTGGG TCGCCGGCTT CGATATCCTC TATGCGCTGC AGGACATGGA ATTCGACCAG GCCGCGGGGC TGCACTCCAT CCCGGCGAAG CTGGGGGTTA ACGGCTCGCT TTGGACCTCG CGCATCTTCC ATCTCGTCGC CTGCCTCTTC CTCGCGGCGC TCTATATTTT CATGCACCTT GGCACCTTCT TCCTCGCCGG GCTGGCAGCC ACCTGCGGCA TGCTCCTGTA CGAGCACCAT CTGCTTCGCG GGGGGGATTT AAGCCGCCTG GATGCCGCTT TCTTCAACAT GAACGGCTAC ATCAGCGTGA CGCTCTTCGC GGCGACGCTC TTGGATAGGG TCTCGGCGGG GGGGATGTGA
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Protein sequence | MTLYARTRVF LEMIKFSHTI FALPFAFTGA LLAAGGLPTV SQAGWIVCAM VGARTAAMGL NRVIDAEIDA RNPRTAGRAI PAGLLGRGAV ICFIVLSVLL MLFAARMLNP LCLYLSPVAL GFILLYSYCK RFTALAHVVL GICLAGAPLG AWIAIRGSAD LPAYLLAFAV LFWVAGFDIL YALQDMEFDQ AAGLHSIPAK LGVNGSLWTS RIFHLVACLF LAALYIFMHL GTFFLAGLAA TCGMLLYEHH LLRGGDLSRL DAAFFNMNGY ISVTLFAATL LDRVSAGGM
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