Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0222 |
Symbol | |
ID | 6783046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 262023 |
End bp | 263417 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642766189 |
Product | transcriptional regulator, GntR family with aminotransferase domain |
Protein accession | YP_002137049 |
Protein GI | 197116622 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCATCC TGGACCATCA CAGCAAGCTG CCGCTGTACA CGCAACTCTA TGATCAGATG AAAGCGGGCG TCCTCTCCGG GAAGCTGCCA TCTCACTCAA AGCTGCTCTC GGTCCGGGAG TTGGCCGCCG AGCTCTCCAT CAGCCGAAAC ACCGTCGAAA ACGCCTACCT TGAACTCTGT GCGGAAGGGT ATATCTACAG CAAGCCGCGC AGCGGTTATT TCGTTTCCGC GCTGGCGCCG GATGCCCTGC CTTTGCCGTC GCCCCGCATA AAGGAGCAGC GCGCCCACCT CCCCGAGCCT GAACCAAAGG GGAGCATCGA CTTCCACCCC GCGCGGCTAG ACCCGGACAC CTTTCCCACA TCGTTATGGC GCAGATGCTT CCTGGACTCA TTGCGCCAGA GTCGCAGCGC GCTGGCCCAG TACGGCGCCC CCCAGGGCGA GCTGAGGCTG CGCTCCAGTA TCCGGCGTTA CCTCGAGCGG TCACGCGGAG TGGCCTGCGA CCCTGAGCAA GTGGTGATCT GCTCCGGTCT CCAGCAGAGC CTCGACCTCG TTGCACAGAT CTTGAAAGAG CGGCGGCCGG CGGTGGCGGT CGAAAACCCG GGCTTCCACC TTCCCAGGTC AATTTTCCGC AACCACGGCT TCGAGACAGT TCCCATAGCT GTTGGCTCCG GAGGCCTCGA CCTCGATGCC CTGGAATCGA GCGGCGCCAC CCTTGTCTAC GTCACACCCT CGCATCAGTT CCCAACCGGA TGCGTGATGC CCATCGCCAA CCGGCTCAGC CTGATCGAAT GGGCGAATGC GGGGGACCGG CTGGTGATCG AGGACGATTA CGACAGCGAG CTTCGCTATC ACGGCAAACC GATCCCCTCG CTGCAGGGGT TGCACCCCGA CGGGAACATC GTCTATCTCG GAACCTTTTC CAAGGTACTG TCGCCGGCTT TGCGCGTCAG TTACCTGGTG CTGCCTTACG CGCTGCTATC CGCCTATCGG CGGCTTTTCC GCGACTATGC CTGCACCGTC TCCCTTTTGG AGCAGGCGAC CCTTGCCAGG TTCATGGAGC AGGGGGACTG GGATCGGCAC CTGCGGCGGA TGCGCACTCT CTACCAAAAG AAGCACGATG CCATGCTGCG GGCGGTCGAG ACCCATTTCG GCCCCAAAGC CCTTGTACTC GGACAGGGTG CGGGACTGCA CATGGTGCTG GAACTCTCCC AGCACGACCT GAGCGAAAAA GAGCTCATCT CACGAGCCAG GAGCAAGGGG ATCGAGCTAT TTCCCTATTC CGCCACCTGT GCCGAAGAAG TGGGCAGTTG CAGCAGGGTC GTCTTGGGCT TTGGCGGCGT AAAACCGGAC GTCATAGATC GGGGCGTCGA ACTTTTGTCC CGGGCATGGT ACTGA
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Protein sequence | MFILDHHSKL PLYTQLYDQM KAGVLSGKLP SHSKLLSVRE LAAELSISRN TVENAYLELC AEGYIYSKPR SGYFVSALAP DALPLPSPRI KEQRAHLPEP EPKGSIDFHP ARLDPDTFPT SLWRRCFLDS LRQSRSALAQ YGAPQGELRL RSSIRRYLER SRGVACDPEQ VVICSGLQQS LDLVAQILKE RRPAVAVENP GFHLPRSIFR NHGFETVPIA VGSGGLDLDA LESSGATLVY VTPSHQFPTG CVMPIANRLS LIEWANAGDR LVIEDDYDSE LRYHGKPIPS LQGLHPDGNI VYLGTFSKVL SPALRVSYLV LPYALLSAYR RLFRDYACTV SLLEQATLAR FMEQGDWDRH LRRMRTLYQK KHDAMLRAVE THFGPKALVL GQGAGLHMVL ELSQHDLSEK ELISRARSKG IELFPYSATC AEEVGSCSRV VLGFGGVKPD VIDRGVELLS RAWY
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