| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0178 |
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| Symbol | |
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| ID | 6783000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 207747 |
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| End bp | 210131 |
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| Gene Length | 2385 bp |
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| Protein Length | 794 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642766144 |
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| Product | trifunctional NADH dehydrogenase I subunit B/C/D |
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| Protein accession | YP_002137005 |
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| Protein GI | 197116578 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases
[COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7
[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
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| TIGRFAM ID | [TIGR01957] NADH-quinone oxidoreductase, B subunit
[TIGR01961] NADH (or F420H2) dehydrogenase, subunit C
[TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCCAGG GTGACGACGA CAAAATACCC GAAAACGTAC TGCTCGCCTC CCTGGACGAC
ATGATCAACT GGGGGAGGGC GAATTCTCTA TGGCCGATGT TCTTCGGCCT TTCCTGCTGC
TTCGTCGAAA TGATGACCTC GTTTACCTCC CGCTACGACG TCTCGCGCTT CGGGGCGGAG
GTGCTCCGCG GCACCCCCCG CGAATCCGAC CTCATGGTGA TAGCCGGCAC CGTCTTCAAG
AAGATGGCCC CCAGCATCCT CAGGCTCTAC GACCAGATGG CCGAGCCCAA GTGGGTTATC
TCCATGGGGA GCTGCGCCAA CTCTGGCGGG ATGTACGACG TCTACAGCGT GGTCCAGGGG
GTGAACCAGA TACTCCCGGT CGATCTCTAC ATCCCGGGTT GCCCGCCGCG GCCGGAGTCG
TTCCTGGAAG GGCTGATGCT GCTGCAGCAA AAGATCCGCA GCGAAGAGCG CCCGACCCGC
CCGGTGCTGA GGATGCAGGG GGGGACCCAG GGGACGGTGG CTCCCATCCT GGTGGACGGC
GCCACCAAGT CGCGCGACAC CCGGGGCCCC GGGATGGAGG GGATCGCCAT ACGCGGGAGC
GCCATGCAGC CCCCCTACTT CGCGGCCCCG CGCTCCGACG AGCTCTGGCG CCCGAAACAG
CCCCGGCTCC CCTACCCCGA CTTCAATCTG CAGGCGGAAC TGCAGGGGGC GTTCGCAGGC
CAGGTGGTCC TGGACGAAAC CGCCTGCGAC ATGCTGACCT ACCGCGCGCC GGCGCGCCTG
GTGCCGGAAC TGCTCCGGCA CCTCAAAGAG CGCAAGGAGT CCCCCTTCAG GCGCCTGGAG
GACATCGCCT GCGTGGACGA GTCCTGCCGT CGCGACCGGG AAAAGTACAA GGATTTCACC
GTCAATTACC ACCTCACCTG CTTCGACACC CCGGGGAGGA TCAGGATCAA GACCGAGCTT
GAGGGGAGTT ATCCCGAGGC CCCCAGCATC ACCTCCGTCT TCCCGGTCGC CAACTGGTAC
GAGCGGGAAG CCTACGACAT GTTCGGCATC CGCTTCGCCG GCCATCCCAA CCTGAGAAGG
ATACTGATGC CCCCGGATTG GGACGGGCAT CCGCTCCGCA AAGAGCACCC GGCCCGGGCC
ACGGAGCTTC CCCCCTACAC GGCGGAAGAC GCGCGCAGGC AAAAAGCGCT CCCAGCTGGC
GACTTCTTCG ACCGGGTGGA CGACGAGACC CTGATCCTGA ATTTGGGCCC GCAGCACCCC
GGCACCCACG GCGTTATCAG GTTCGTGCTC AAGCTCTCCG GCGAAGAGAT CGTCGACATG
GACAGCGACA TAGGCTACCA CCACCGGGCC GCGGAGAAGA CCGGCGAGCG GCAGAACTGG
CACCAGTACA TCCCCTACAC GGACCGGGTG GACTACCTCT CGGGGGTGCA GAACAACCTG
GCCTACCTGA ACTCTGTGGA GACCCTCTGC GGCATCGAGA TACCGGACCG GGCCATCTAC
ATCCGGGTCA TGCTCTGCGA GCTGTTCCGG ATCGCGAACC ACCTGGTCTG GCTCGGCACC
TTCGCCTCCG ACCTGGGCGC CATGACTCCG GTCTTCTACA CCTTCACCGA CCGGGAGAAG
ATCTTCGACA TCGTCGAGTT CATCACCGGC GGCCGGATGC ACCCCGCCTG GTTCCGGATC
GGCGGCGTCG CCGAGGACCT ACCCGAGGGG TGGCAGGAGA AGGTGCATTC CTTCCTGGAA
TGGTTCCCGG GAAGGCTCGC CGAGTACGAA AAGCTCCTCT CGGGGAACCC CATCTTCGTG
GCGCGGCTGA AAGGTGTCTC CGCCATCACC GTAGACACGG CTCTTGAGTG GGGGATCACC
GGACCCAACC TGCGCGCCTG CGACTTCGCC TGGGACCTCC GGAAGAAAAT GCCCTACGGC
GGCTACGACC GCTTCGAATT CGAGGTGGCG ACGGCGCAAG GGGGCGACTG CTACGCACGC
TACCAAGTGC GGATGGAGGA GATGAGGCAG TCGCTCTCCA TCGTGAGGCA GGCCGCGGCC
GGGATGCCGG GGGGGCGTTT CATCTCCCCT GACTACCGCT ACACTCTGCC GCAGAAACGG
GACGCCCTCG AAGATATCGA GTCGCTGATC CACCACTTCG TCAACTCCAC CCGCGGCATC
TCCCCCCCGA AAGGGGAGTG CTACGCACCC ATCGAGGGGT CGAAGGGTGA GTACGGCTAT
TTCGCCGTGT CGGACGGGCT GCATACCGCC TACCGCATGA GGATACGGAC CGCCACCTTT
CCGCACATCC AGTCGCTTCC GGTGTTAAGC CGCGGCTGGC TGGTGTCCGA TTTCCTGGCC
ATTCTTGGGT CGTTGGATTT CGTGCTTTCG GATTTGGACC GGTAA
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| Protein sequence | MSQGDDDKIP ENVLLASLDD MINWGRANSL WPMFFGLSCC FVEMMTSFTS RYDVSRFGAE
VLRGTPRESD LMVIAGTVFK KMAPSILRLY DQMAEPKWVI SMGSCANSGG MYDVYSVVQG
VNQILPVDLY IPGCPPRPES FLEGLMLLQQ KIRSEERPTR PVLRMQGGTQ GTVAPILVDG
ATKSRDTRGP GMEGIAIRGS AMQPPYFAAP RSDELWRPKQ PRLPYPDFNL QAELQGAFAG
QVVLDETACD MLTYRAPARL VPELLRHLKE RKESPFRRLE DIACVDESCR RDREKYKDFT
VNYHLTCFDT PGRIRIKTEL EGSYPEAPSI TSVFPVANWY EREAYDMFGI RFAGHPNLRR
ILMPPDWDGH PLRKEHPARA TELPPYTAED ARRQKALPAG DFFDRVDDET LILNLGPQHP
GTHGVIRFVL KLSGEEIVDM DSDIGYHHRA AEKTGERQNW HQYIPYTDRV DYLSGVQNNL
AYLNSVETLC GIEIPDRAIY IRVMLCELFR IANHLVWLGT FASDLGAMTP VFYTFTDREK
IFDIVEFITG GRMHPAWFRI GGVAEDLPEG WQEKVHSFLE WFPGRLAEYE KLLSGNPIFV
ARLKGVSAIT VDTALEWGIT GPNLRACDFA WDLRKKMPYG GYDRFEFEVA TAQGGDCYAR
YQVRMEEMRQ SLSIVRQAAA GMPGGRFISP DYRYTLPQKR DALEDIESLI HHFVNSTRGI
SPPKGECYAP IEGSKGEYGY FAVSDGLHTA YRMRIRTATF PHIQSLPVLS RGWLVSDFLA
ILGSLDFVLS DLDR
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