Gene Gbem_0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0172 
Symbol 
ID6782994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand- 
Start bp201864 
End bp202394 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content66% 
IMG OID642766138 
ProductNADH dehydrogenase subunit I 
Protein accessionYP_002136999 
Protein GI197116572 
COG category[C] Energy production and conversion 
COG ID[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 
TIGRFAM ID[TIGR01971] NADH-quinone oxidoreductase, chain I 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCATTC TGACCGACAT AAAAGAGATC TTGACCGGCC TTTCCATCAC CTTCAGCCAT 
ATCTGGCGGA AGCCCGTAAC CGTGCAGTTC CCCGAGGAGC AAAGGCCGAT GCCCCCCCGT 
TTCCGCGGCA GCATCGTGCT CACCCGGGAC CCCGACGGCG CCGAGCGCTG CGTCGCCTGC 
TACCTCTGCT CCGGCGCCTG CCCCGTGGAC TGCATCTCCA TGGCCGCTGC CGAAGGGGAG 
AACGGCCGCC GCTACGCCGC CTGGTTCCGC ATCAACTTCT CCCGCTGCAT CCTGTGCGGC 
ATGTGCGCCG AGGCGTGCCC GACCCTTGCC ATCCAGATGT CGCCCGAGAT GTTCCGCTGC 
AAGCGGCAGG TCATGGACAT GGTGTACGAG AAGGAGGACC TCCTCATCGA CGGCACCGGG 
AAGGATCCCG AATACAACTA TTACCGGCAT GCGGGAATCG GCGTGGTGCA GCCGCGGGGG 
AGCTCCCCCA GCGAGCAGGA ACCTGCCGAC CCGCGCAGCC TGCTGCCGTA A
 
Protein sequence
MPILTDIKEI LTGLSITFSH IWRKPVTVQF PEEQRPMPPR FRGSIVLTRD PDGAERCVAC 
YLCSGACPVD CISMAAAEGE NGRRYAAWFR INFSRCILCG MCAEACPTLA IQMSPEMFRC 
KRQVMDMVYE KEDLLIDGTG KDPEYNYYRH AGIGVVQPRG SSPSEQEPAD PRSLLP