Gene Gbem_0164 details

Gene Information

• Locus tag: Gbem_0164
• Symbol: obgE
• ID: 6782986
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: +
• Start bp: 194169
• End bp: 195185
• Gene Length: 1017 bp
• Protein Length: 338 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 642766130
• Product: GTPase ObgE
• Protein accession: YP_002136991
• Protein GI: 197116564
• COG category: [R] General function prediction only
• COG ID: [COG0536] Predicted GTPase
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR02729] Obg family GTPase CgtA

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.000099426
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTTTTA TAGATGAAGT TAAGATAAAC GTGAAGTCCG GCGACGGCGG TGCCGGGTGC 
GTCTCCTTCC GCAGGGAGAA GTTCATCCCG CTGGGAGGGC CCGACGGCGG CGACGGCGGC 
AAGGGTGGCG ACGTGATCGT CAAGGTGTCT TCGCACCTCT CCACGCTGCT CGACCTGCGC 
CAGCACCCGC ACCAGAAGGC CGGCCGCGGC AAGAACGGCA TGGGTAGCGA CCGGCACGGC 
GCGAACGGCC ACACCCTGGA GATCCTGGTG CCGCAGGGGA CCGTGATCAA GGATGCCGAG 
ACCGGGGAGA TCCTCGCCGA CCTCGCCGAG CCCGACTCCT CCATGGTGCT CCTGAAGGGG 
GGGCGCGGCG GGCAGGGGAA CGCCCGGTTC AAGACCGCCA CCCACAAGGC TCCCAAGTTC 
GCGCAGCCCG GCGAGCCTGG CGAAGAGCGC TGGATCAGGA TGGAGCTGAA GCTGATGGCG 
GACGTGGGTC TGCTCGGCAT GCCCAGCGTC GGGAAGTCCT CGCTGATCGC GAAGATCTCG 
GCCGCACGCC CCAAGATCGC CGAATACCAC TTCACCACGC TCAAGCCGAG CCTCGGCGTG 
GTCCAGTACA AGAACTACCG CTCCTTCGTC ATGGCCGATA TTCCCGGTCT GATCGAGGGG 
GCGAGCGAGG GGGCGGGGCT TGGGCACCGT TTCCTCAAAC ACCTGGAGCG TACCGGGCAG 
CTGCTGCACC TGCTCGACCT CTCCTGGATG CCGGATCGGG ATCCCATCGC AGAGTACGAG 
GCGATCAACC GTGAGCTCGC GCTCTTCAAC CCCGAGCTTG CCGACAAACG CCAAACTGTC 
GTCGTCAACA AGATCGACCT CCCCCATGTC AGGGAGAACC TGAAAGAGAT CCTCCCCTAC 
TTCGAGGAGC GGGGAATAAA GGTCTTCCCC ATCTCCGCCG CGACCGGGGA AGGGATACCG 
GAGCTCCTGG ACGACATCGC CTTCAACCTG TGGGGCGAGC CGGAAGAGAC CTGGTAG 

 

Protein sequence

MSFIDEVKIN VKSGDGGAGC VSFRREKFIP LGGPDGGDGG KGGDVIVKVS SHLSTLLDLR 
QHPHQKAGRG KNGMGSDRHG ANGHTLEILV PQGTVIKDAE TGEILADLAE PDSSMVLLKG 
GRGGQGNARF KTATHKAPKF AQPGEPGEER WIRMELKLMA DVGLLGMPSV GKSSLIAKIS 
AARPKIAEYH FTTLKPSLGV VQYKNYRSFV MADIPGLIEG ASEGAGLGHR FLKHLERTGQ 
LLHLLDLSWM PDRDPIAEYE AINRELALFN PELADKRQTV VVNKIDLPHV RENLKEILPY 
FEERGIKVFP ISAATGEGIP ELLDDIAFNL WGEPEETW