| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0161 |
|---|
| Symbol | |
|---|
| ID | 6782983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 193040 |
|---|
| End bp | 193342 |
|---|
| Gene Length | 303 bp |
|---|
| Protein Length | 100 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642766127 |
|---|
| Product | Rieske (2Fe-2S) domain protein |
|---|
| Protein accession | YP_002136988 |
|---|
| Protein GI | 197116561 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000394797 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCTTTG CCGCGAAGGT GTCCGAGGTT CCGGAATTTG GCAAGAAGCT GGTCGAGGCA
GGCGGAGTGC AGGTGCTCCT GGTGAAGACC AAGGGGACGG TGTACGCCTG CGAGGCGGAA
TGCCCGCACC AGGGCGCGCC CCTGCAGGGG GCTTTCATCA AGGAGGCAGG GCGTCTTTCC
TGCCCGAGGC ACGGCTACCG TTTCGATCTC GCCACCGGCG CCTGTGCCGA CCATCAGGAG
TACACCCTGA AGGTGTACCC GGTCGAGATA CGGGGAGACG AGGTGTTCGT CGAAGTTGGC
TGA
|
|---|
| Protein sequence | MVFAAKVSEV PEFGKKLVEA GGVQVLLVKT KGTVYACEAE CPHQGAPLQG AFIKEAGRLS
CPRHGYRFDL ATGACADHQE YTLKVYPVEI RGDEVFVEVG
|
|---|
| |