| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0138 |
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| Symbol | |
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| ID | 6782960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 170631 |
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| End bp | 171491 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642766104 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002136965 |
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| Protein GI | 197116538 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGACCG AAGAAGGGAA ACAGTTCCCG CCGCAGCGCC AGGCGCAGCC GGGAAAAGAA
GCCGAGATGA CGCCCCGGCC GCAAAGCGGC GAGTTCGAGT ACCGCGGGGC CGGAAAGCTG
CAGGGAAAAA CCGCCCTCAT CACCGGCGGC GACAGCGGCA TCGGCCGGGC CGTCGCCATC
GCCTTTGCCC GCGAGGGTGC CAACATCGCT TTCGGATACC TGGAGGAAGA CCAGGACGCG
AAAGAGACCC GGGACATCGT GGAGCGGGAG GGGGTGCGCT GCCTCGCCTT CCGGGGCGAC
GTGGGTCAGG AGCAGTTCTG CCTCGACATC GTGAAAAAGA CGTTGGAGGC ATTTGGCCGG
CTGGACATAG TGGTGAACAA CGCGGCCGAG CAACATTACC GCGAGAGCAT AGAAGAGATC
TCCTCTGAGC AGTTGGAGCG GACCTTCAGG ACCAACATCT TTTCCTATTT CTACCTGGTG
AAGGCCGCTC TCAAGCATTT GCAAGAAGGA TCGCGGATCA TCAACACCAC CTCGGTAACC
GCCTACAAGG GAAACCCCAA CCTCCTCGAC TACTCCTCCA CTAAGGGGGC CATCGTTGCC
TTCACCCGCT CCCTTGCCCT CTCGCTCGCT GGAAAGGGGA TCCTGGTGAA CGCCGTCGCC
CCAGGTCCGA TCTGGACCCC GCTCATCCCC GGAACCTTTC CGGAGGAGAA GACCGAGCAG
TTCGGCGGGA ACGTGCTTTT GAAGAGGGCG GGACAGCCGG TGGAAGTGGC CCACAGCTAC
GTCTTCCTCG CCTCCGAAGG GGGCTCCTAC ATGACCGGGC AGGTGCTGCA CCCAAACGGC
GGAACCATCG TAGGAGGGTA G
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| Protein sequence | MPTEEGKQFP PQRQAQPGKE AEMTPRPQSG EFEYRGAGKL QGKTALITGG DSGIGRAVAI
AFAREGANIA FGYLEEDQDA KETRDIVERE GVRCLAFRGD VGQEQFCLDI VKKTLEAFGR
LDIVVNNAAE QHYRESIEEI SSEQLERTFR TNIFSYFYLV KAALKHLQEG SRIINTTSVT
AYKGNPNLLD YSSTKGAIVA FTRSLALSLA GKGILVNAVA PGPIWTPLIP GTFPEEKTEQ
FGGNVLLKRA GQPVEVAHSY VFLASEGGSY MTGQVLHPNG GTIVGG
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