Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0132 |
Symbol | |
ID | 6782954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 156622 |
End bp | 158511 |
Gene Length | 1890 bp |
Protein Length | 629 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642766098 |
Product | malto-oligosyltrehalose trehalohydrolase |
Protein accession | YP_002136959 |
Protein GI | 197116532 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
TIGRFAM ID | [TIGR02402] malto-oligosyltrehalose trehalohydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAGCTG CTGCCTGGAA ATTCGATCTG GGTGCCACCG TGCTTAAAGA GGGAGGAACC CGCTTTCGGG TCTGGGCTCC GAAGTCGCAG ACGGTGAACC TTCTCATCCT TTCCGGCAAG GCGGCCGGCG CGGTCCTCAT GCAGCAGGAG GAAATGGGTT ACTACTCCGC CACGGTAGCC GGGGTGGCCG ACGGCGACCG CTATCTCTAC CAGCTCGACA ACGGCAAGAC CTTCCCCGAT CCCGTTTCGC GCTACCAGCC GGATGGGGTG CACGAGCCTT CCCAGGTGGT GGACCCAGAT CTGTTCGAAT GGTCGGACGA AGGGTGGACC GGCATCCCGC TGGAGCAGTA CCGGATCTAC GAGATCCACA CTGGGACCTT CACCAAGGAG GGGACCTTCG AGGCGGCGAT ATCTTTTCTC GACTACCTGG TTGACTTGGG GATCACCGCG GTCGAGATCA TGCCGGTGTC GCAGTGCCCC GGCAAGCGCA ACTGGGGTTA CGACGGCGTT TTTCACTTCG CGCCGCAGAG CAGTTTCGGC GGCCCGGACG GATTGAAAAG GCTGGTGAAC GCCTGCCACA AGAAGGGGCT CGCGGTGCTC CTGGACGTGG TCTACAACCA CTTCGGCCCG GAAGGGAACT ACCTCTGGGA TTTCGGCCAC TACTTCACCG ACAAGTACCG CACCCCGTGG GGGCGGGCCA TGAACCTGGA CGGGGCCTAC AGCGACTCGG TCCTCGAGTT CTTCTTGCTG AACGCTGGGT ACTGGATCAA CGAGTTCCGC TTCGATGGCC TCAGGCTGGA CGCGGTGGAC TGGATCTTCG ATCAGACGCC GAAGCCGCTT TTGCAGCGGC TGGCCGAGGA GGTGCACCTG CACCGGGGAC GGCTGGGGAG GGAGATCTTC CTCTTCGCGG AGAACGACAC CAACGACGCG CGACTGATCA AGCCGCCGGA GTTGTGCGGC TTCGGCTTGG ACGCCCAGTG GTGCGACAAT TTCCACCACG CGCTGCGCAC CCTGCTCACT AGAGAGACTA CCGGCTACTA CGAGGACTTC GGCCAGTTCA GCCAGATGGT GAAGACTTAC GAGGAGGCCT TCGTCTTCAC CGGCGAATAC TCCCAATACC GCAAGCGCCG CCAGGGAGGA CCGGCAAAGG ACCTCCCCAC CTCGCAGTTC GTGGTCTTCT CGCAGAACCA CGACCAGGTT GGAAACAGAA AATGCGGGGA CCGGCTGAGC GGGAGCCTCC CGGTGGGACA GCTCCTTTTG GTCGCCGGGG TAGTGATCCT TTCCCCCTAC ATCCCGATGC TGTTCATGGG AGAGGAGTAC GGGGAAAAGG CGCCGTTCCA CTACTTCATC GACCATGGCA ACCCGGAGCT GGTCGAGCTG GTCAGGAAGG GGAAACACGA GGAGCATGCC TCGGGCATCT GCGAGGGGGA GATCCCAGAC CCGGCGGCGG AGGAGACCTT CCTGGAGTCG AAGATAGATC TCGTCAGCGA AAAGGTGGGG GAGCAGGCGG TCATCCTTGA GTTCTACAAG AAACTCTTCT CGCTGCGCAG CACCTTGCCC GCGCTCCAGG TGTTCCAGCG CGAGCAGATG GAGGTGTCCG GGATGCCTCA GCAAAAGGTC CTCTGCTTCA GAAGGTGGTC CGGCCAGAAT TCGGTCCTTT GCCTCTTCAG CTTCAACAAC ATGCAGCAGG AGATCTCCCT GCCTCTTGCC GAAGGGACTT GGGAAAAGCT GCTCGACTCC TCGGCCCAGC ACTGGCTCGG GCCGGGTGAA GAGGCACCGG TGAAGGTCGA GGTGACAGGA GAGCCGGGAG AGATTCCGGT ATCGATCAAC CCATACAGCG TGGTGGTTTA CGCCGCCGAC CTGACAGGAG GAGCACATGG AGCAAGCTAA
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Protein sequence | MVAAAWKFDL GATVLKEGGT RFRVWAPKSQ TVNLLILSGK AAGAVLMQQE EMGYYSATVA GVADGDRYLY QLDNGKTFPD PVSRYQPDGV HEPSQVVDPD LFEWSDEGWT GIPLEQYRIY EIHTGTFTKE GTFEAAISFL DYLVDLGITA VEIMPVSQCP GKRNWGYDGV FHFAPQSSFG GPDGLKRLVN ACHKKGLAVL LDVVYNHFGP EGNYLWDFGH YFTDKYRTPW GRAMNLDGAY SDSVLEFFLL NAGYWINEFR FDGLRLDAVD WIFDQTPKPL LQRLAEEVHL HRGRLGREIF LFAENDTNDA RLIKPPELCG FGLDAQWCDN FHHALRTLLT RETTGYYEDF GQFSQMVKTY EEAFVFTGEY SQYRKRRQGG PAKDLPTSQF VVFSQNHDQV GNRKCGDRLS GSLPVGQLLL VAGVVILSPY IPMLFMGEEY GEKAPFHYFI DHGNPELVEL VRKGKHEEHA SGICEGEIPD PAAEETFLES KIDLVSEKVG EQAVILEFYK KLFSLRSTLP ALQVFQREQM EVSGMPQQKV LCFRRWSGQN SVLCLFSFNN MQQEISLPLA EGTWEKLLDS SAQHWLGPGE EAPVKVEVTG EPGEIPVSIN PYSVVVYAAD LTGGAHGAS
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