Gene Gbem_0132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0132 
Symbol 
ID6782954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp156622 
End bp158511 
Gene Length1890 bp 
Protein Length629 aa 
Translation table11 
GC content62% 
IMG OID642766098 
Productmalto-oligosyltrehalose trehalohydrolase 
Protein accessionYP_002136959 
Protein GI197116532 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0296] 1,4-alpha-glucan branching enzyme 
TIGRFAM ID[TIGR02402] malto-oligosyltrehalose trehalohydrolase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAGCTG CTGCCTGGAA ATTCGATCTG GGTGCCACCG TGCTTAAAGA GGGAGGAACC 
CGCTTTCGGG TCTGGGCTCC GAAGTCGCAG ACGGTGAACC TTCTCATCCT TTCCGGCAAG
GCGGCCGGCG CGGTCCTCAT GCAGCAGGAG GAAATGGGTT ACTACTCCGC CACGGTAGCC
GGGGTGGCCG ACGGCGACCG CTATCTCTAC CAGCTCGACA ACGGCAAGAC CTTCCCCGAT
CCCGTTTCGC GCTACCAGCC GGATGGGGTG CACGAGCCTT CCCAGGTGGT GGACCCAGAT
CTGTTCGAAT GGTCGGACGA AGGGTGGACC GGCATCCCGC TGGAGCAGTA CCGGATCTAC
GAGATCCACA CTGGGACCTT CACCAAGGAG GGGACCTTCG AGGCGGCGAT ATCTTTTCTC
GACTACCTGG TTGACTTGGG GATCACCGCG GTCGAGATCA TGCCGGTGTC GCAGTGCCCC
GGCAAGCGCA ACTGGGGTTA CGACGGCGTT TTTCACTTCG CGCCGCAGAG CAGTTTCGGC
GGCCCGGACG GATTGAAAAG GCTGGTGAAC GCCTGCCACA AGAAGGGGCT CGCGGTGCTC
CTGGACGTGG TCTACAACCA CTTCGGCCCG GAAGGGAACT ACCTCTGGGA TTTCGGCCAC
TACTTCACCG ACAAGTACCG CACCCCGTGG GGGCGGGCCA TGAACCTGGA CGGGGCCTAC
AGCGACTCGG TCCTCGAGTT CTTCTTGCTG AACGCTGGGT ACTGGATCAA CGAGTTCCGC
TTCGATGGCC TCAGGCTGGA CGCGGTGGAC TGGATCTTCG ATCAGACGCC GAAGCCGCTT
TTGCAGCGGC TGGCCGAGGA GGTGCACCTG CACCGGGGAC GGCTGGGGAG GGAGATCTTC
CTCTTCGCGG AGAACGACAC CAACGACGCG CGACTGATCA AGCCGCCGGA GTTGTGCGGC
TTCGGCTTGG ACGCCCAGTG GTGCGACAAT TTCCACCACG CGCTGCGCAC CCTGCTCACT
AGAGAGACTA CCGGCTACTA CGAGGACTTC GGCCAGTTCA GCCAGATGGT GAAGACTTAC
GAGGAGGCCT TCGTCTTCAC CGGCGAATAC TCCCAATACC GCAAGCGCCG CCAGGGAGGA
CCGGCAAAGG ACCTCCCCAC CTCGCAGTTC GTGGTCTTCT CGCAGAACCA CGACCAGGTT
GGAAACAGAA AATGCGGGGA CCGGCTGAGC GGGAGCCTCC CGGTGGGACA GCTCCTTTTG
GTCGCCGGGG TAGTGATCCT TTCCCCCTAC ATCCCGATGC TGTTCATGGG AGAGGAGTAC
GGGGAAAAGG CGCCGTTCCA CTACTTCATC GACCATGGCA ACCCGGAGCT GGTCGAGCTG
GTCAGGAAGG GGAAACACGA GGAGCATGCC TCGGGCATCT GCGAGGGGGA GATCCCAGAC
CCGGCGGCGG AGGAGACCTT CCTGGAGTCG AAGATAGATC TCGTCAGCGA AAAGGTGGGG
GAGCAGGCGG TCATCCTTGA GTTCTACAAG AAACTCTTCT CGCTGCGCAG CACCTTGCCC
GCGCTCCAGG TGTTCCAGCG CGAGCAGATG GAGGTGTCCG GGATGCCTCA GCAAAAGGTC
CTCTGCTTCA GAAGGTGGTC CGGCCAGAAT TCGGTCCTTT GCCTCTTCAG CTTCAACAAC
ATGCAGCAGG AGATCTCCCT GCCTCTTGCC GAAGGGACTT GGGAAAAGCT GCTCGACTCC
TCGGCCCAGC ACTGGCTCGG GCCGGGTGAA GAGGCACCGG TGAAGGTCGA GGTGACAGGA
GAGCCGGGAG AGATTCCGGT ATCGATCAAC CCATACAGCG TGGTGGTTTA CGCCGCCGAC
CTGACAGGAG GAGCACATGG AGCAAGCTAA
 
Protein sequence
MVAAAWKFDL GATVLKEGGT RFRVWAPKSQ TVNLLILSGK AAGAVLMQQE EMGYYSATVA 
GVADGDRYLY QLDNGKTFPD PVSRYQPDGV HEPSQVVDPD LFEWSDEGWT GIPLEQYRIY
EIHTGTFTKE GTFEAAISFL DYLVDLGITA VEIMPVSQCP GKRNWGYDGV FHFAPQSSFG
GPDGLKRLVN ACHKKGLAVL LDVVYNHFGP EGNYLWDFGH YFTDKYRTPW GRAMNLDGAY
SDSVLEFFLL NAGYWINEFR FDGLRLDAVD WIFDQTPKPL LQRLAEEVHL HRGRLGREIF
LFAENDTNDA RLIKPPELCG FGLDAQWCDN FHHALRTLLT RETTGYYEDF GQFSQMVKTY
EEAFVFTGEY SQYRKRRQGG PAKDLPTSQF VVFSQNHDQV GNRKCGDRLS GSLPVGQLLL
VAGVVILSPY IPMLFMGEEY GEKAPFHYFI DHGNPELVEL VRKGKHEEHA SGICEGEIPD
PAAEETFLES KIDLVSEKVG EQAVILEFYK KLFSLRSTLP ALQVFQREQM EVSGMPQQKV
LCFRRWSGQN SVLCLFSFNN MQQEISLPLA EGTWEKLLDS SAQHWLGPGE EAPVKVEVTG
EPGEIPVSIN PYSVVVYAAD LTGGAHGAS