Gene Gbem_0108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0108 
Symbol 
ID6782926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp130066 
End bp131334 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content59% 
IMG OID642766070 
Productseryl-tRNA synthetase 
Protein accessionYP_002136935 
Protein GI197116508 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0172] Seryl-tRNA synthetase 
TIGRFAM ID[TIGR00414] seryl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGACG CGAGATACAT ACGCGAAAAC CTGGAAACTG TAGAGGCGCG GCTCAAAACC 
AGAGGCGAAG GCGTTGATAT TGCGCTCTTC AAGGAACTGG ACGGCCGTCG TCGCGAACTT
CTGCAGCAAA GCGAGACCCT CAAGGCACTG CGCAACAAGG TGACCGAAGA GATCGCGCGA
CTGCAGGACA AGAGCCAGGC GGCGGAGCGC AAGACCGAGA TGCGCGAGGT CTCGCAACAG
ATCAAGGGGA TCGACGAGTC GCTCAGGAGC GTCGAAGAGG AACTGCAGAA CTTCCTGCTC
ACCGTTCCCA ACGTACCCAA TGAGACCACC CCGATAGGTA AGTCCGAAGA GGACAACGTC
GTGGTGCGGA CTTGGGGCGA GGTCCCGACG CTTTCCTTCG AGCCGAAACC GCACTGGGAG
ATCGGCGAGG GACTCGGCAT CCTCGACTTC GAGCGCGGCG CCAAGCTCGC CGGAGCACGC
TTCACCCTCT ACCGTGGGGC TGGAGCGAGG CTCGAACGCG CTCTCATTAA TTACATGCTG
GATCTGCATA CTGACGAGCA TAAATATATT GAAATGCTCC CGCCCTTTAT GGTAAACAGG
GAATGCATGA CCGGGACCGG GCAGCTGCCC AAGTTTGAGG AAGATCTCTT CCATATGGAA
GGGGTCGATT TTTTTCTCAT CCCCACGGCT GAAGTACCGG TAACCAACAT ACACCGCGGC
GAGATCCTGA AGGGTTCCGA TCTCCCGATT TCTTATGTTG CCTACACGCC CTGCTTCCGC
AAGGAGGCTG GTTCTTACGG CAAGGACACG CGTGGGCTGA TCAGGCAGCA CCAGTTCAAC
AAGGTGGAAC TGGTCAAGTT CACCTCCCCC GAGGATTCCT ACCAGCAATT GCAGAAGCTG
CTTGGCCACG CCGAGGAAGT GCTGCGCAGG TTGCAGATAC CTTACCGGGT GGTGGAGCTT
TGCACCGGCG ACATAGGTTT TTCCGCCGCC AAGACCTTCG ATATCGAGGT CTGGCTGCCG
GGACAGAACT GCTACCGGGA GATTTCCTCC TGCAGCTGCT TCGAAGATTT CCAGGCCCGT
CGCGCCGGGA TTCGGTTCCG CCCGGAAGAG AAGGCCAAGC CCGAGTTCGT GCACACGCTG
AACGGCTCCG GCCTCGCCGT CGGCAGGACC CTGGTGGCGG TGCTGGAAAA CTACCAGCAG
GCAGACGGCT CGGTGCTGAT CCCCGAGGTG CTCAGGCCTT ACATGGGCGG GGCAGAGAGA
ATCAGCTAG
 
Protein sequence
MLDARYIREN LETVEARLKT RGEGVDIALF KELDGRRREL LQQSETLKAL RNKVTEEIAR 
LQDKSQAAER KTEMREVSQQ IKGIDESLRS VEEELQNFLL TVPNVPNETT PIGKSEEDNV
VVRTWGEVPT LSFEPKPHWE IGEGLGILDF ERGAKLAGAR FTLYRGAGAR LERALINYML
DLHTDEHKYI EMLPPFMVNR ECMTGTGQLP KFEEDLFHME GVDFFLIPTA EVPVTNIHRG
EILKGSDLPI SYVAYTPCFR KEAGSYGKDT RGLIRQHQFN KVELVKFTSP EDSYQQLQKL
LGHAEEVLRR LQIPYRVVEL CTGDIGFSAA KTFDIEVWLP GQNCYREISS CSCFEDFQAR
RAGIRFRPEE KAKPEFVHTL NGSGLAVGRT LVAVLENYQQ ADGSVLIPEV LRPYMGGAER
IS