Gene Gbem_0102 details

Gene Information

• Locus tag: Gbem_0102
• ID: 6782920
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: +
• Start bp: 125570
• End bp: 126217
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 642766064
• Product: protein of unknown function DUF480
• Protein accession: YP_002136929
• Protein GI: 197116502
• COG category: [S] Function unknown
• COG ID: [COG3132] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.0000409835
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAGCGA CGCTCGACGG CACCGAACTG CGGGTGCTGG GCTCTTTGGT CGAGAAAGAC 
CTTACCACCC CCGAATATTA CCCGCTCTCC CTGAACGCCC TGGTGAATGC CTGCAACCAG 
AAGTCGAACC GGGATCCGGT TTTGAGTCTC GACGAGTCCC AGGTGACCCG CGCGCTCGAT 
ACGCTGAGGT TCAAGCAGTA CGCCCTGGTC TCGGGGAGCG GCGGACGGGT CGCCAAATAC 
CGCCACGCCC TGGTGGAGAA GTTCCGCTTC TCCCCGGCGG AACTGGCCAT CCTGTGCGAA 
CTGATGCTGC GGGGTCCGCA GACAGTGGGA GAGCTTAGGG GGAGGGGAGA GCGGATGCAC 
AAGTTCTCCG ATCTCTCCGA GGTGGAGTCG GTGCTGGCAG ACCTCGCGGA GCGCACCCCT 
TCCTTGGTGG CAAAGCTGCC GCTGCAGCCC GGGCGCAAGG AGCCGCGCTA CTGCCAGCTC 
TTCAGCGGCG AGCCGGACCT CTCGGAGCTT GCGGCGCAAA TGGAAGCGCG CGGTGCGGGC 
GCCGACGGCG AGAAGATAGC CCGGCTGGAG CAGGAGCTCT CCGAGCTGCG CGAGGAAGTG 
GCGTCCCTGC GGGAGACTAT CGCGGAATTC AGAAAATCGT TCGAGTAG 

 

Protein sequence

MEATLDGTEL RVLGSLVEKD LTTPEYYPLS LNALVNACNQ KSNRDPVLSL DESQVTRALD 
TLRFKQYALV SGSGGRVAKY RHALVEKFRF SPAELAILCE LMLRGPQTVG ELRGRGERMH 
KFSDLSEVES VLADLAERTP SLVAKLPLQP GRKEPRYCQL FSGEPDLSEL AAQMEARGAG 
ADGEKIARLE QELSELREEV ASLRETIAEF RKSFE