| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0085 |
|---|
| Symbol | |
|---|
| ID | 6782903 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 103767 |
|---|
| End bp | 104936 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642766047 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002136912 |
|---|
| Protein GI | 197116485 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGTTTCC CCGTTTCGCC GCTGATCGCG GGCGTGCATC CGCCTCCCAT CTCGGAGGTG
AAGAGTTGGA TCGCCGGCGC CCCCGCCGGG CTTCCCCTCA TCGATCTCTG CCAGGCCATA
CCCGACTACC CCCCGCCGCG GGAGCTCACC GACCACCTGG CGGAAGTGAT GCTCGACCCG
CACACCTCGC GCTACAGCAT CGACGAGGGG CTTCCCGAGG TGCGGGAGGC GATCTGCGGC
GGTTACCGCG AGCTCTACGG CGCCTGCATC GATCCCTCCC AGCTCATCCT CACCATCGGC
GCCAGCCAGG CCTTCTGGCT CGCCATGGTG ACGCTCTGCC GTGCCGGGGA CGAGGTCATC
GTCCAGCTCC CCGCCTACTT CGACCACCCG ATGGCGCTCG AGGTGCTCGG CATCCGTTGC
GTCTACGCCC CGTTCGAGGA GGCGAGGGGC GGGCTCCCCA GTGTCGCCGC CATAGCCTCC
CTGATCACGG AGAAGACCCG CGCCATCCTG CTGGTCACTC CCAGTAACCC CACCGGCGCC
GTGATATCGC CCGAGACCGT GCGCGAACTG CACCGCCTCG CCGTCTCCCG CGACATCGCC
CTGGTGCTGG ACGAGACCTA CAACAGCTTC ATCACGGGGG GCGTCCGTCC CCACGACCTG
TTCCAGGAGC CGAACTGGGG AGACCACTTC GTCCATATCG CCTCCTTCGG CAAGACCTTT
GCGCTCACCG GCTACCGCGC CGGGATGCTG GCCGCGTCTG AGGAATTCAT CCGCCACGCG
CTGAAGGCGC AGGACACCAT GGCGGTATGC CAGCCGCGCG TCGCACAGCA CGCGGTGAAG
TACGGCTTCG AGCGCCTTTC GGGATGGGTC GCCGAGAACC GGGTCATGAT GGAGAGAAGG
CACGAGGTGT TCCGTGCCGA ATTCGAGAAG CCCGGCAACG CCTTTAAGCT GGTGGCGAGC
GGACCCTTCT TCGGCTGGGT GCGGCATCCG CTGCCGAAAG CCACGGGGAG AGAGGTCGCC
AGGCGCCTGG TGGAGGAAGC GGGGATCCTG CTGCTGCCGG GGGAGGTGTT CGGGCCGGGG
CTGGAGGGGT ATCTGAGGCT CGCCTTCGGC AACATCAGGG AGGAGACCAT ACCCGAGGCG
GTGGCGCGGT TCAGGGAATT CAATCCGTAA
|
|---|
| Protein sequence | MRFPVSPLIA GVHPPPISEV KSWIAGAPAG LPLIDLCQAI PDYPPPRELT DHLAEVMLDP
HTSRYSIDEG LPEVREAICG GYRELYGACI DPSQLILTIG ASQAFWLAMV TLCRAGDEVI
VQLPAYFDHP MALEVLGIRC VYAPFEEARG GLPSVAAIAS LITEKTRAIL LVTPSNPTGA
VISPETVREL HRLAVSRDIA LVLDETYNSF ITGGVRPHDL FQEPNWGDHF VHIASFGKTF
ALTGYRAGML AASEEFIRHA LKAQDTMAVC QPRVAQHAVK YGFERLSGWV AENRVMMERR
HEVFRAEFEK PGNAFKLVAS GPFFGWVRHP LPKATGREVA RRLVEEAGIL LLPGEVFGPG
LEGYLRLAFG NIREETIPEA VARFREFNP
|
|---|
| |