| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0081 |
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| Symbol | |
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| ID | 6782899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 96951 |
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| End bp | 99365 |
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| Gene Length | 2415 bp |
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| Protein Length | 804 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642766043 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_002136908 |
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| Protein GI | 197116481 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAGGT GCAGCCTGAA AATAAAGATG AGCTTGGTCG TCTTCCTGCT GATTGGTACG
GTGAGCTCGT GCGTTGCCGG CCTGGGACTG CTGTTTTTCA TGCGGGAGTT CAAGGAGACC
GTCGCCGCGC GGCAGTTCGC GGTGGTGAGC GCCATGGCGG GCGAGCTCGA TGAAAAGATC
CTGGCGGCGC AGCGCGAGCT GGTCGCGGTG GCGATGAGCA TCCCGCCGGC CACGGGGAGA
GATGCCGCGG CCATGCAGAG TTTCCTCGAC CAACGCCTCG ATCTGCACCA GGTGTTCAGC
GACGGCACGG CTTTCTTCAG CGCCGACGGA AGGCTCGTAG CCTTCTCCCC GGGGCAGACC
CCCGACATAG GCGACAATTT TTCCAAGCTC GATTTTTTGG CCGCCACGCT CAGATCCGGG
AAGGCGCTGA TTTCCGAACC TTTCCCGTCG CAGCGAAGGC GCGGGCATCA GGTGGTGATG
TTCACCGTCC CGGTGCTGGG GGGGGGGGGG AGGATGATCG GAGTCCTGGG AGGACGCGTG
GATCTTATGG AAGAAAACTT CCTGAGCCGC GTGGCGCACC TGAACCTCCA GGACGGCGGG
GAATTCTTCC TCTTCAATCG GCAAAGGCAG ATAGTCGCGC ACCGCAATCA TGACAAGATC
GGCAAGCCCA TGCCGGCGAA GGGAATGCGG GAGCTTTTGG ACCGGGCCAT CGACGGATAC
CAGGGGAGCG GCGAGATGGA TAACCCTGCC GGGTCGCCCT CGATCTACTC CTTCAAGAGG
CTTCCCGCGC GCGGCTGGAT ATTGGCGGCG GAACGCCCCC TCTCCGAGGC GTACGCACCG
ATCTACCGCG CGCAGAAACT GGCGATCTTT AGCCTCGCTT TGCTGCTTCC TTTGGCCCTG
ATCACCGTTT GGCTCTTCGT CGGCCGCCTC ACCGCGCCCT TGCAACTCTT CGCCGGGCGG
GTGCGCGAGA TAGGGGGGGA TGCCGGCAAG TACCTCCCGG TACTGGTGAA TAACAACGAC
GAGATCGGCG ACCTGGCCCA GGCCTTCAAC GCCATGATGC AGGAACTGGT GATCAACAAG
CGGTCGCTGG AAAGCGAGAA GGGGTTTGCC GTGCAGCTCT TGCAGCACTC GGCGGTCCCC
TGTTTCGTCA TCGACGCCGA GCACCGGGTG ATCATCTGGA ACAGCGCCAT GGAGGAGCTG
ACCGGCGTCG CCGCAGGGGC GCAGCTGGGG CAGATCGAAC CTTGGCGCGC CTTCTACGAC
GAGCCGCGCC GCGTTCTGGC CGACATCGTG GTGGCGGGAA CACTGTACGA GATGGCGGAT
CTCTATTGCT GCTACGCGGA TTCCCCTCTC ATCCCCGAAG GGCTGCGGGC CGAGGGGTGG
TACCGGCTCA AAGGGAAGCA GAGATACCTG GCCTTCGAGG CGGCTCCCAT CCGGGACGCC
GAGGGGAGGC TGATCGCCGC CATCCAGACC ATGCAGGACA TGACGCTTCG GGCCAACAAC
GAGGAGCAGT TGAGGGGGAT GGTGGCGGCC ATAGGGGAGA GCGAGGAGCG GTTCCGGCGC
CTGGTGGAGC TTTCGCTGGA CGGGATCGCC ATCCTGGTCG GGCGCCGCTT CGTTTTCGTC
AACCCGGCGG GGTGCGAGAT GCTGGGGTAC CGCTCAAGCG ACGAGCTGTT GGGGAAGGAG
ATGCGCGAAT TCATCCAGCG GGATTCAGAG CAGCAGTTCC TGGAGCAGGC AACCTGCGCC
GAGGAAACCG GCACCACCGC CCCCTGGATA GAGGAGCGGC TGTTGCGCCA CGACCGGACC
GCCGTGGAGG TGGAACTGGG GGTGGGTCCG TTCGTTTTCC GCGGTGAAAA CGCGCTGCAG
GTCATCTTCA GGGATATCAC CGAGAGAAAG CTCGCCAAAG CGAGGCTGGA GACCCTGGCC
CACTACGACT CGCTGACCTC GCTCCCCAAC CGGGTGCTCT TCTTCGACCG GCTGCGCCAC
GCTGTATTCG AGGCGAAGCG CTACCAGCAC CCGATGGCGC TCATGTTCCT GGATCTGGAC
AGCTTCAAGC AGGTGAACGA CCGGCTGGGG CATGCGGCAG GGGACGCGGT GCTGGTGGAG
GCGGGGTACC GGCTTAGGGA GTGCGTGCGG GCCTGCGACA TGGTGGCCCG CATGGGCGGG
GACGAGTTCA CCATCATCCT CACCAAGATG GCGGACCGGC GGGACGCGTC CCTGGTGGCC
GAGAGGGTGC TAGAGGCGTT CGCCCTCCCC TTCCTGGTGG AAGGGGAAAG CGCACAGGTG
GGGGTGAGTA TCGGGATCTG CGTCTATCCC GACTGCGACG CCGATCTGGA CGGGATGGTG
CGCTACGCGG ACTACGCCAT GTACCAGGCC AAGCAGGACG GCAAGAACGT CTACCGCTTC
CACTTGGGAG GCTAG
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| Protein sequence | MSRCSLKIKM SLVVFLLIGT VSSCVAGLGL LFFMREFKET VAARQFAVVS AMAGELDEKI
LAAQRELVAV AMSIPPATGR DAAAMQSFLD QRLDLHQVFS DGTAFFSADG RLVAFSPGQT
PDIGDNFSKL DFLAATLRSG KALISEPFPS QRRRGHQVVM FTVPVLGGGG RMIGVLGGRV
DLMEENFLSR VAHLNLQDGG EFFLFNRQRQ IVAHRNHDKI GKPMPAKGMR ELLDRAIDGY
QGSGEMDNPA GSPSIYSFKR LPARGWILAA ERPLSEAYAP IYRAQKLAIF SLALLLPLAL
ITVWLFVGRL TAPLQLFAGR VREIGGDAGK YLPVLVNNND EIGDLAQAFN AMMQELVINK
RSLESEKGFA VQLLQHSAVP CFVIDAEHRV IIWNSAMEEL TGVAAGAQLG QIEPWRAFYD
EPRRVLADIV VAGTLYEMAD LYCCYADSPL IPEGLRAEGW YRLKGKQRYL AFEAAPIRDA
EGRLIAAIQT MQDMTLRANN EEQLRGMVAA IGESEERFRR LVELSLDGIA ILVGRRFVFV
NPAGCEMLGY RSSDELLGKE MREFIQRDSE QQFLEQATCA EETGTTAPWI EERLLRHDRT
AVEVELGVGP FVFRGENALQ VIFRDITERK LAKARLETLA HYDSLTSLPN RVLFFDRLRH
AVFEAKRYQH PMALMFLDLD SFKQVNDRLG HAAGDAVLVE AGYRLRECVR ACDMVARMGG
DEFTIILTKM ADRRDASLVA ERVLEAFALP FLVEGESAQV GVSIGICVYP DCDADLDGMV
RYADYAMYQA KQDGKNVYRF HLGG
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